RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 FAM58BPP0C7Q3 252 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 SUPT20HL2P0C7V6 817 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 CPT1AP50416 773 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 CACNA2D1P54289 1103 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 CSHL1Q14406 222 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 ZNF484Q5JVG2 852 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 TAF2Q6P1X5 1199 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 MIER2Q8N344 545 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 PPP1R10Q96QC0 940 aaKnown RBP10.9□□□□□ -0.66
NEK1-206ENST00000510533 CISHQ9NSE2 258 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 FBXO28Q9NVF7 368 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 CES2O00748 559 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 SMNDC1O75940 238 aaKnown RBP eCLIP10.9□□□□□ -0.66
NEK1-206ENST00000510533 MPOP05164 745 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 RAP1GAPP47736 663 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 POLD3Q15054 466 aaPredicted RBP10.9□□□□□ -0.66
NEK1-206ENST00000510533 AGKQ53H12 422 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 PLEKHA7Q6IQ23 1121 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 HOMEZQ8IX15 550 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 KRT78Q8N1N4 520 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 RXFP2Q8WXD0 754 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 VPS33AQ96AX1 596 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 MYOZ2Q9NPC6 264 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 PRG3Q9Y2Y8 225 aaPredicted RBP10.9□□□□□ -0.66
NEK1-206ENST00000510533 FBXO21O94952 628 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 CENPAP49450 140 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 TMC3Q7Z5M5 1100 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 FAM131BQ86XD5 332 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 SLC22A9Q8IVM8 553 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 EMC1Q8N766 993 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 KAT2BQ92831 832 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 TMEM176AQ96HP8 235 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 TMEM79Q9BSE2 394 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 BTBD10Q9BSF8 475 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 KRCC1Q9NPI7 259 aaPredicted RBP10.9□□□□□ -0.66
NEK1-206ENST00000510533 TCF7L2Q9NQB0 619 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 ASS1P00966 412 aaKnown RBP10.9□□□□□ -0.66
NEK1-206ENST00000510533 RAD23AP54725 363 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 SLC34A1Q06495 639 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 C1QBPQ07021 282 aaKnown RBP10.9□□□□□ -0.66
NEK1-206ENST00000510533 PGS1Q32NB8 556 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 ARMCX4Q5H9R4 360 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 TBCELQ5QJ74 424 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 RINLQ6ZS11 566 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 ABRAQ8N0Z2 381 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 COLGALT1Q8NBJ5 622 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 KCTD14Q9BQ13 255 aaPredicted RBP10.9□□□□□ -0.66
NEK1-206ENST00000510533 OSBPL10Q9BXB5 764 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 NDEL1Q9GZM8 345 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 KLHL25Q9H0H3 589 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 CYP3A43Q9HB55 503 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 DOLKQ9UPQ8 538 aa10.9□□□□□ -0.66
NEK1-206ENST00000510533 C17orf102A2RUQ5 167 aa10.9□□□□□ -0.67
NEK1-206ENST00000510533 ZNF839A8K0R7 811 aa10.9□□□□□ -0.67
NEK1-206ENST00000510533 CRTAMO95727 393 aa10.9□□□□□ -0.67
NEK1-206ENST00000510533 ZNF682O95780 498 aa10.9□□□□□ -0.67
NEK1-206ENST00000510533 JCHAINP01591 159 aa10.9□□□□□ -0.67
NEK1-206ENST00000510533 STAG3L1P0CL83 205 aa10.9□□□□□ -0.67
NEK1-206ENST00000510533 PSMA3P25788 255 aa10.9□□□□□ -0.67
NEK1-206ENST00000510533 SEC23AQ15436 765 aa10.9□□□□□ -0.67
NEK1-206ENST00000510533 PRAMEF18Q5VWM3 479 aa10.9□□□□□ -0.67
NEK1-206ENST00000510533 KHDRBS2Q5VWX1 349 aaKnown RBP10.9□□□□□ -0.67
NEK1-206ENST00000510533 ADGRF2Q8IZF7 708 aa10.9□□□□□ -0.67
NEK1-206ENST00000510533 CLPBQ9H078 707 aa10.9□□□□□ -0.67
NEK1-206ENST00000510533 GANQ9H2C0 597 aa10.9□□□□□ -0.67
NEK1-206ENST00000510533 VANGL2Q9ULK5 521 aa10.9□□□□□ -0.67
NEK1-206ENST00000510533 CYB561D2O14569 222 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 DNALI1O14645 258 aaPredicted RBP10.89□□□□□ -0.67
NEK1-206ENST00000510533 CNOT3O75175 753 aaKnown RBP10.89□□□□□ -0.67
NEK1-206ENST00000510533 SERPINE1P05121 402 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 SLC1A6P48664 564 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 MYL6P60660 151 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 PTPN11Q06124 597 aaPredicted RBP10.89□□□□□ -0.67
NEK1-206ENST00000510533 ZNF844Q08AG5 666 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 TRAF2Q12933 501 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 SV2AQ7L0J3 742 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 HDDC2Q7Z4H3 204 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 MCOLN2Q8IZK6 566 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 CASP10Q92851 521 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 SLC5A5Q92911 643 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 MRPS26Q9BYN8 205 aaKnown RBP10.89□□□□□ -0.67
NEK1-206ENST00000510533 DEFB129Q9H1M3 183 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 SCUBE2Q9NQ36 999 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 FAM205AQ6ZU69 1335 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 MYO3AQ8NEV4 1616 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 GLP2RO95838 553 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 IFNA14P01570 189 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 TPBGLP0DKB5 382 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 CYP2F1P24903 491 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 CLCN3P51790 818 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 OXCT1P55809 520 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 N4BP2L1Q5TBK1 243 aaPredicted RBP10.89□□□□□ -0.67
NEK1-206ENST00000510533 MIB1Q86YT6 1006 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 PPP2R3CQ969Q6 453 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.89□□□□□ -0.67
NEK1-206ENST00000510533 ADGRB3O60242 1522 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 MAGEB16A2A368 324 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 FCHO1O14526 889 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 PLA2G6O60733 806 aa10.89□□□□□ -0.67
NEK1-206ENST00000510533 BAIAP3O94812 1187 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms