RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 TADA2BQ86TJ2 420 aa28.11■■■□□ 2.09
SNF8-208ENST00000510195 C12orf40Q86WS4 652 aa28.11■■■□□ 2.09
SNF8-208ENST00000510195 ETFBKMTQ8IXQ9 262 aa28.11■■■□□ 2.09
SNF8-208ENST00000510195 ZC3H3Q8IXZ2 948 aaKnown RBP28.11■■■□□ 2.09
SNF8-208ENST00000510195 SEMA4DQ92854 862 aa28.11■■■□□ 2.09
SNF8-208ENST00000510195 CNOT6LQ96LI5 555 aaKnown RBP28.11■■■□□ 2.09
SNF8-208ENST00000510195 UBXN6Q9BZV1 441 aa28.11■■■□□ 2.09
SNF8-208ENST00000510195 DUSP15Q9H1R2 295 aaPredicted RBP28.11■■■□□ 2.09
SNF8-208ENST00000510195 USP3Q9Y6I4 520 aa28.11■■■□□ 2.09
SNF8-208ENST00000510195 ALDH1A2O94788 518 aa28.1■■■□□ 2.09
SNF8-208ENST00000510195 KIR2DL1P43626 348 aaPredicted RBP28.1■■■□□ 2.09
SNF8-208ENST00000510195 LRRC63Q05C16 580 aa28.1■■■□□ 2.09
SNF8-208ENST00000510195 EOGTQ5NDL2 527 aa28.1■■■□□ 2.09
SNF8-208ENST00000510195 PLA2G2CQ5R387 149 aa28.1■■■□□ 2.09
SNF8-208ENST00000510195 PPP1R26Q5T8A7 1209 aaPredicted RBP28.1■■■□□ 2.09
SNF8-208ENST00000510195 PHTF2Q8N3S3 785 aa28.1■■■□□ 2.09
SNF8-208ENST00000510195 IL17RCQ8NAC3 791 aa28.1■■■□□ 2.09
SNF8-208ENST00000510195 HEXIM2Q96MH2 286 aaKnown RBP28.1■■■□□ 2.09
SNF8-208ENST00000510195 CDK5RAP1Q96SZ6 601 aaKnown RBP28.1■■■□□ 2.09
SNF8-208ENST00000510195 CISHQ9NSE2 258 aa28.1■■■□□ 2.09
SNF8-208ENST00000510195 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.1■■■□□ 2.09
SNF8-208ENST00000510195 DEC1Q9P2X7 70 aa28.1■■■□□ 2.09
SNF8-208ENST00000510195 LSM7Q9UK45 103 aaKnown RBP28.1■■■□□ 2.09
SNF8-208ENST00000510195 COQ4Q9Y3A0 265 aa28.1■■■□□ 2.09
SNF8-208ENST00000510195 CYP26A1O43174 497 aa28.09■■■□□ 2.09
SNF8-208ENST00000510195 GREM1O60565 184 aa28.09■■■□□ 2.09
SNF8-208ENST00000510195 TBX18O95935 607 aa28.09■■■□□ 2.09
SNF8-208ENST00000510195 PLA2G4AP47712 749 aa28.09■■■□□ 2.09
SNF8-208ENST00000510195 LIMK1P53667 647 aa28.09■■■□□ 2.09
SNF8-208ENST00000510195 ELOA2Q8IYF1 753 aaPredicted RBP28.09■■■□□ 2.09
SNF8-208ENST00000510195 C12orf50Q8NA57 414 aaPredicted RBP28.09■■■□□ 2.09
SNF8-208ENST00000510195 SMARCE1Q969G3 411 aa28.09■■■□□ 2.09
SNF8-208ENST00000510195 EEF2KMTQ96G04 330 aa28.09■■■□□ 2.09
SNF8-208ENST00000510195 TMEM176AQ96HP8 235 aa28.09■■■□□ 2.09
SNF8-208ENST00000510195 OSER1Q9NX31 292 aa28.09■■■□□ 2.09
SNF8-208ENST00000510195 CLIC5Q9NZA1 410 aa28.09■■■□□ 2.09
SNF8-208ENST00000510195 DNMT3LQ9UJW3 386 aa28.09■■■□□ 2.09
SNF8-208ENST00000510195 IRF1P10914 325 aa28.08■■■□□ 2.09
SNF8-208ENST00000510195 CHRM1P11229 460 aaPredicted RBP28.08■■■□□ 2.09
SNF8-208ENST00000510195 RARGP13631 454 aa28.08■■■□□ 2.09
SNF8-208ENST00000510195 MESP2Q0VG99 397 aa28.08■■■□□ 2.09
SNF8-208ENST00000510195 TRMT11Q7Z4G4 463 aaKnown RBP28.08■■■□□ 2.09
SNF8-208ENST00000510195 TMEM25Q86YD3 366 aa28.08■■■□□ 2.09
SNF8-208ENST00000510195 CCDC33Q8N5R6 958 aa28.08■■■□□ 2.09
SNF8-208ENST00000510195 ALLCQ8N6M5 410 aa28.08■■■□□ 2.09
SNF8-208ENST00000510195 TXNDC5Q8NBS9 432 aaKnown RBP28.08■■■□□ 2.09
SNF8-208ENST00000510195 DDX1Q92499 740 aaKnown RBP28.08■■■□□ 2.09
SNF8-208ENST00000510195 POLMQ9NP87 494 aaPredicted RBP28.08■■■□□ 2.09
SNF8-208ENST00000510195 VPS45Q9NRW7 570 aa28.08■■■□□ 2.09
SNF8-208ENST00000510195 SPTBN2O15020 2390 aa28.07■■■□□ 2.08
SNF8-208ENST00000510195 A0A1W2PQH9 124 aa28.07■■■□□ 2.08
SNF8-208ENST00000510195 TBC1D3BA6NDS4 549 aa28.07■■■□□ 2.08
SNF8-208ENST00000510195 TULP3O75386 442 aa28.07■■■□□ 2.08
SNF8-208ENST00000510195 TIE1P35590 1138 aa28.07■■■□□ 2.08
SNF8-208ENST00000510195 ANO4Q32M45 955 aa28.07■■■□□ 2.08
SNF8-208ENST00000510195 AASDHQ4L235 1098 aaPredicted RBP28.07■■■□□ 2.08
SNF8-208ENST00000510195 ZNF394Q53GI3 561 aa28.07■■■□□ 2.08
SNF8-208ENST00000510195 ARHGAP17Q68EM7 881 aa28.07■■■□□ 2.08
SNF8-208ENST00000510195 SLC4A11Q8NBS3 891 aa28.07■■■□□ 2.08
SNF8-208ENST00000510195 WBP2Q969T9 261 aa28.07■■■□□ 2.08
SNF8-208ENST00000510195 JAKMIP2Q96AA8 810 aa28.07■■■□□ 2.08
SNF8-208ENST00000510195 NMUR1Q9HB89 426 aa28.07■■■□□ 2.08
SNF8-208ENST00000510195 MARK1Q9P0L2 795 aa28.07■■■□□ 2.08
SNF8-208ENST00000510195 WDR35Q9P2L0 1181 aa28.07■■■□□ 2.08
SNF8-208ENST00000510195 DCDC2BA2VCK2 349 aa28.06■■■□□ 2.08
SNF8-208ENST00000510195 KLF8O95600 359 aaPredicted RBP28.06■■■□□ 2.08
SNF8-208ENST00000510195 RALAP11233 206 aa28.06■■■□□ 2.08
SNF8-208ENST00000510195 MPLP40238 635 aa28.06■■■□□ 2.08
SNF8-208ENST00000510195 PPP1R2P41236 205 aa28.06■■■□□ 2.08
SNF8-208ENST00000510195 RAD23BP54727 409 aa28.06■■■□□ 2.08
SNF8-208ENST00000510195 SLC8A3P57103 927 aa28.06■■■□□ 2.08
SNF8-208ENST00000510195 KDSRQ06136 332 aa28.06■■■□□ 2.08
SNF8-208ENST00000510195 TCERG1LQ5VWI1 586 aa28.06■■■□□ 2.08
SNF8-208ENST00000510195 ANKRD40Q6AI12 368 aa28.06■■■□□ 2.08
SNF8-208ENST00000510195 ANO7Q6IWH7 933 aa28.06■■■□□ 2.08
SNF8-208ENST00000510195 TMEM92Q6UXU6 159 aa28.06■■■□□ 2.08
SNF8-208ENST00000510195 XPO6Q96QU8 1125 aaKnown RBP28.06■■■□□ 2.08
SNF8-208ENST00000510195 NAGPAQ9UK23 515 aa28.06■■■□□ 2.08
SNF8-208ENST00000510195 STARD13Q9Y3M8 1113 aa28.06■■■□□ 2.08
SNF8-208ENST00000510195 LAMA1P25391 3075 aa28.05■■■□□ 2.08
SNF8-208ENST00000510195 GDF9O60383 454 aa28.05■■■□□ 2.08
SNF8-208ENST00000510195 STIM1Q13586 685 aa28.05■■■□□ 2.08
SNF8-208ENST00000510195 C10orf120Q5SQS8 335 aa28.05■■■□□ 2.08
SNF8-208ENST00000510195 SFTPA1Q8IWL2 248 aa28.05■■■□□ 2.08
SNF8-208ENST00000510195 ARHGAP18Q8N392 663 aa28.05■■■□□ 2.08
SNF8-208ENST00000510195 NAT16Q8N8M0 369 aa28.05■■■□□ 2.08
SNF8-208ENST00000510195 TERB1Q8NA31 727 aa28.05■■■□□ 2.08
SNF8-208ENST00000510195 ANKRD52Q8NB46 1076 aa28.05■■■□□ 2.08
SNF8-208ENST00000510195 MDGA1Q8NFP4 955 aa28.05■■■□□ 2.08
SNF8-208ENST00000510195 OLIG1Q8TAK6 271 aa28.05■■■□□ 2.08
SNF8-208ENST00000510195 MYO18AQ92614 2054 aaKnown RBP28.05■■■□□ 2.08
SNF8-208ENST00000510195 ARMCX3Q9UH62 379 aaPredicted RBP28.05■■■□□ 2.08
SNF8-208ENST00000510195 ZNF510Q9Y2H8 683 aa28.05■■■□□ 2.08
SNF8-208ENST00000510195 ANTXRLA6NF34 631 aa28.04■■■□□ 2.08
SNF8-208ENST00000510195 SGK1O00141 431 aa28.04■■■□□ 2.08
SNF8-208ENST00000510195 DCLK1O15075 740 aa28.04■■■□□ 2.08
SNF8-208ENST00000510195 YWHAEP62258 255 aaKnown RBP28.04■■■□□ 2.08
SNF8-208ENST00000510195 CBWD6Q4V339 395 aa28.04■■■□□ 2.08
SNF8-208ENST00000510195 DCAF17Q5H9S7 520 aaPredicted RBP28.04■■■□□ 2.08
SNF8-208ENST00000510195 RAB41Q5JT25 222 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms