RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 KCNQ3O43525 872 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 PROP1O75360 226 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 SKAP2O75563 359 aaPredicted RBP4.53□□□□□ -1.68
CAST-229ENST00000510098 TCEA3O75764 348 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 VNN1O95497 513 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 ERBB2P04626 1255 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 HSP90AA1P07900 732 aaKnown RBP4.53□□□□□ -1.68
CAST-229ENST00000510098 IL6RP08887 468 aaPredicted RBP4.53□□□□□ -1.68
CAST-229ENST00000510098 EGR1P18146 543 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 NTSR1P30989 418 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 PDE1AP54750 535 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 C21orf58P58505 322 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 BMPR2Q13873 1038 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 PUM3Q15397 648 aaKnown RBP4.53□□□□□ -1.68
CAST-229ENST00000510098 RAB30Q15771 203 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 PDCD2Q16342 344 aaPredicted RBP4.53□□□□□ -1.68
CAST-229ENST00000510098 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.53□□□□□ -1.68
CAST-229ENST00000510098 FAM83BQ5T0W9 1011 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 USP49Q70CQ1 688 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 KRT73Q86Y46 540 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 LRRC71Q8N4P6 559 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 PAF1Q8N7H5 531 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 IPO4Q8TEX9 1081 aaKnown RBP4.53□□□□□ -1.68
CAST-229ENST00000510098 RFKQ969G6 155 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 GRAMD1AQ96CP6 724 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 LTV1Q96GA3 475 aaPredicted RBP4.53□□□□□ -1.68
CAST-229ENST00000510098 FAM227BQ96M60 508 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 HAPLN3Q96S86 360 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 TIMP4Q99727 224 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 DPCDQ9BVM2 203 aaPredicted RBP4.53□□□□□ -1.68
CAST-229ENST00000510098 PTPRHQ9HD43 1115 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 NECTIN3Q9NQS3 549 aa4.53□□□□□ -1.68
CAST-229ENST00000510098 DRG1Q9Y295 367 aaKnown RBP4.53□□□□□ -1.68
CAST-229ENST00000510098 GOLGA6L3A6NEY3 463 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 ONECUT2O95948 504 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 PECAM1P16284 738 aaPredicted RBP4.52□□□□□ -1.69
CAST-229ENST00000510098 ZNF37AP17032 561 aaPredicted RBP4.52□□□□□ -1.69
CAST-229ENST00000510098 WT1P19544 449 aaPredicted RBP4.52□□□□□ -1.69
CAST-229ENST00000510098 BDNFP23560 247 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 MST1P26927 711 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 RBL1P28749 1068 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 NSUN2Q08J23 767 aaKnown RBP eCLIP4.52□□□□□ -1.69
CAST-229ENST00000510098 LMOD3Q0VAK6 560 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 BLMHQ13867 455 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 KRT72Q14CN4 511 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 MAPKAPK3Q16644 382 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 SLC5A9Q2M3M2 681 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 CCDC38Q502W7 563 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 ANO1Q5XXA6 986 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 ARL6IP4Q66PJ3 421 aaKnown RBP4.52□□□□□ -1.69
CAST-229ENST00000510098 RAP1GAP2Q684P5 730 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 CCDC174Q6PII3 467 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 KRBA2Q6ZNG9 492 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 KIAA0408Q6ZU52 694 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 PCGF5Q86SE9 256 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 RAB11FIP4Q86YS3 637 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 FSTL5Q8N475 847 aaPredicted RBP4.52□□□□□ -1.69
CAST-229ENST00000510098 SOCS4Q8WXH5 440 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 GDF15Q99988 308 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 VN1R3Q9BXE9 311 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 ARPP21Q9UBL0 812 aaPredicted RBP4.52□□□□□ -1.69
CAST-229ENST00000510098 FBXO9Q9UK97 447 aaPredicted RBP4.52□□□□□ -1.69
CAST-229ENST00000510098 SH2B3Q9UQQ2 575 aa4.52□□□□□ -1.69
CAST-229ENST00000510098 KAT6AQ92794 2004 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 FER1L4A9Z1Z3 1794 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 hCG_1642624A0A1W2PR95 340 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 PIP5K1BO14986 540 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 EBLN1P0CF75 366 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 SRGAP2BP0DMP2 458 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 NDUFB7P17568 137 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 ITPKBP27987 946 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 CHKAP35790 457 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 TPTEP56180 551 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 TIAL1Q01085 375 aaKnown RBP eCLIP4.51□□□□□ -1.69
CAST-229ENST00000510098 NHLH1Q02575 133 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 TMEM95Q3KNT9 176 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 ZACNQ401N2 412 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 ARHGAP15Q53QZ3 475 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 COLEC12Q5KU26 742 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 CLEC9AQ6UXN8 241 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 ZNF551Q7Z340 670 aaPredicted RBP4.51□□□□□ -1.69
CAST-229ENST00000510098 C11orf44Q8N8P7 122 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 ATG16L2Q8NAA4 619 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 ABHD5Q8WTS1 349 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 VOPP1Q96AW1 172 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 SARAFQ96BY9 339 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 ZDHHC12Q96GR4 267 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 PRPF18Q99633 342 aaKnown RBP4.51□□□□□ -1.69
CAST-229ENST00000510098 PPCSQ9HAB8 311 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 OBP2BQ9NPH6 170 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 ARHGEF3Q9NR81 526 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 LRFN1Q9P244 771 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 WNT6Q9Y6F9 365 aa4.51□□□□□ -1.69
CAST-229ENST00000510098 ARHGEF17Q96PE2 2063 aaPredicted RBP4.51□□□□□ -1.69
CAST-229ENST00000510098 A0A0U1RQG5 324 aaPredicted RBP4.5□□□□□ -1.69
CAST-229ENST00000510098 AQP12BA6NM10 295 aa4.5□□□□□ -1.69
CAST-229ENST00000510098 LGALS16A8MUM7 142 aa4.5□□□□□ -1.69
CAST-229ENST00000510098 AGPSO00116 658 aa4.5□□□□□ -1.69
CAST-229ENST00000510098 EXOC5O00471 708 aa4.5□□□□□ -1.69
CAST-229ENST00000510098 ZSCAN9O15535 394 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms