RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 SCML2Q9UQR0 700 aa16.24■□□□□ 0.19
TPM3-219ENST00000509409 NCOR2Q9Y618 2525 aa16.24■□□□□ 0.19
TPM3-219ENST00000509409 A0A1W2PQH9 124 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 BCLAF3A2AJT9 711 aaKnown RBP16.23■□□□□ 0.19
TPM3-219ENST00000509409 CETN3O15182 167 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 CYP26A1O43174 497 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 TULP3O75386 442 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 ADRB1P08588 477 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 RARGP13631 454 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 GTF2H1P32780 548 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 KIR2DL1P43626 348 aaPredicted RBP16.23■□□□□ 0.19
TPM3-219ENST00000509409 DHPSP49366 369 aaPredicted RBP16.23■□□□□ 0.19
TPM3-219ENST00000509409 INCA1Q0VD86 236 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 RNF43Q68DV7 783 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 KRT39Q6A163 491 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 TCEAL6Q6IPX3 200 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 TPGS1Q6ZTW0 290 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 HTR3DQ70Z44 454 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 GPRIN1Q7Z2K8 1008 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 TRMT11Q7Z4G4 463 aaKnown RBP16.23■□□□□ 0.19
TPM3-219ENST00000509409 HMGB4Q8WW32 186 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 RLN3Q8WXF3 142 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 TCEAL3Q969E4 200 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 EEF2KMTQ96G04 330 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 CNTNAP3BQ96NU0 1288 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 XPO6Q96QU8 1125 aaKnown RBP16.23■□□□□ 0.19
TPM3-219ENST00000509409 CNTNAP3Q9BZ76 1288 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 NUDT5Q9UKK9 219 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 PCDHA5Q9Y5H7 936 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 PTPRDP23468 1912 aa16.23■□□□□ 0.19
TPM3-219ENST00000509409 SPTBN2O15020 2390 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 GOLGA6L4A6NEF3 574 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 HHLA1C9JL84 531 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 HOXC11O43248 304 aaPredicted RBP16.22■□□□□ 0.19
TPM3-219ENST00000509409 STX10O60499 249 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 CILPO75339 1184 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 EPB41P11171 864 aaKnown RBP16.22■□□□□ 0.19
TPM3-219ENST00000509409 HNRNPLP14866 589 aaKnown RBP eCLIP16.22■□□□□ 0.19
TPM3-219ENST00000509409 BCKDHBP21953 392 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 PLA2G4AP47712 749 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 ENPEPQ07075 957 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 BYSLQ13895 437 aaKnown RBP16.22■□□□□ 0.19
TPM3-219ENST00000509409 C10orf120Q5SQS8 335 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 C10orf76Q5T2E6 689 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 PPP1R26Q5T8A7 1209 aaPredicted RBP16.22■□□□□ 0.19
TPM3-219ENST00000509409 PMS2CLQ68D20 193 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 GRAMD4Q6IC98 578 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 CYP2U1Q7Z449 544 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 TADA2BQ86TJ2 420 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 SMYD4Q8IYR2 804 aaPredicted RBP16.22■□□□□ 0.19
TPM3-219ENST00000509409 ZNF513Q8N8E2 541 aaPredicted RBP16.22■□□□□ 0.19
TPM3-219ENST00000509409 WHAMMQ8TF30 809 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 SPACA7Q96KW9 195 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 DUSP16Q9BY84 665 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 DNAJC17Q9NVM6 304 aaKnown RBP16.22■□□□□ 0.19
TPM3-219ENST00000509409 OSER1Q9NX31 292 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 WDR35Q9P2L0 1181 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 DNMT3LQ9UJW3 386 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 NAGPAQ9UK23 515 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 RALGAPA1Q6GYQ0 2036 aa16.22■□□□□ 0.19
TPM3-219ENST00000509409 TCRBV21S2A2A0A5A6 115 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 NEDD8-MDP1E9PL57 170 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 KHNYNO15037 678 aaKnown RBP16.21■□□□□ 0.19
TPM3-219ENST00000509409 MDM4O15151 490 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 ZBTB24O43167 697 aaPredicted RBP16.21■□□□□ 0.19
TPM3-219ENST00000509409 RALAP11233 206 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 WASP42768 502 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 KIF11P52732 1056 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 EDRF1Q3B7T1 1238 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 SDE2Q6IQ49 451 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 LPCAT2Q7L5N7 544 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 ETFBKMTQ8IXQ9 262 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 KCNV2Q8TDN2 545 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 PIGKQ92643 395 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 SEMA4DQ92854 862 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 TSG101Q99816 390 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 DUSP9Q99956 384 aaKnown RBP16.21■□□□□ 0.19
TPM3-219ENST00000509409 EDEM2Q9BV94 578 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 BBS2Q9BXC9 721 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 NMUR1Q9HB89 426 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 PNPLA8Q9NP80 782 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 CYLDQ9NQC7 956 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 RAB20Q9NX57 234 aa16.21■□□□□ 0.19
TPM3-219ENST00000509409 TRIM24O15164 1050 aa16.2■□□□□ 0.18
TPM3-219ENST00000509409 ADAM23O75077 832 aa16.2■□□□□ 0.18
TPM3-219ENST00000509409 TYRP14679 529 aa16.2■□□□□ 0.18
TPM3-219ENST00000509409 MXI1P50539 228 aa16.2■□□□□ 0.18
TPM3-219ENST00000509409 PNOCQ13519 176 aa16.2■□□□□ 0.18
TPM3-219ENST00000509409 TCERG1LQ5VWI1 586 aa16.2■□□□□ 0.18
TPM3-219ENST00000509409 MIB1Q86YT6 1006 aa16.2■□□□□ 0.18
TPM3-219ENST00000509409 PHTF2Q8N3S3 785 aa16.2■□□□□ 0.18
TPM3-219ENST00000509409 TTC39CQ8N584 583 aa16.2■□□□□ 0.18
TPM3-219ENST00000509409 TERB1Q8NA31 727 aa16.2■□□□□ 0.18
TPM3-219ENST00000509409 FBXL13Q8NEE6 735 aa16.2■□□□□ 0.18
TPM3-219ENST00000509409 TMEM176AQ96HP8 235 aa16.2■□□□□ 0.18
TPM3-219ENST00000509409 CISHQ9NSE2 258 aa16.2■□□□□ 0.18
TPM3-219ENST00000509409 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.2■□□□□ 0.18
TPM3-219ENST00000509409 RMND1Q9NWS8 449 aa16.2■□□□□ 0.18
TPM3-219ENST00000509409 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.19■□□□□ 0.18
TPM3-219ENST00000509409 C4orf47A7E2U8 309 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms