RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 PFKMP08237 780 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 KRT10P13645 584 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 IGFBP6P24592 240 aaPredicted RBP11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 PSMA2P25787 234 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 FOXN2P32314 431 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 AFF1P51825 1210 aaKnown RBP11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 OASLQ15646 514 aaKnown RBP11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 SMTNL2Q2TAL5 461 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 GOLGA7BQ2TAP0 167 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 KLHL38Q2WGJ6 581 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 RNASEH2BQ5TBB1 312 aaKnown RBP11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 CGB2Q6NT52 195 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 LCLAT1Q6UWP7 414 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 VSIG1Q86XK7 387 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 ECHDC2Q86YB7 292 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 SH3TC2Q8TF17 1288 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 AGAP11Q8TF27 550 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 KBTBD7Q8WVZ9 684 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 ST3GAL5Q9UNP4 418 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 PDCD11Q14690 1871 aaKnown RBP11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 hCG_1818297A0A087WSY0 165 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 KPNA7A9QM74 516 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 M0QZ92 97 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 PTGESO14684 152 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 LRCH4O75427 683 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 KRT7P08729 469 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 FGFR1P11362 822 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 KCNE1P15382 129 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 PECAM1P16284 738 aaPredicted RBP11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 ATP2A2P16615 1042 aaKnown RBP11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 ATF7P17544 494 aaPredicted RBP11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 RGS7P49802 495 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 CLNS1AP54105 237 aaKnown RBP11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 ARL4CP56559 192 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 GEMIN4P57678 1058 aaKnown RBP11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 ARHGEF6Q15052 776 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 ZKSCAN8Q15776 578 aaPredicted RBP11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 KCNA10Q16322 511 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 XKR4Q5GH76 650 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 EFHC2Q5JST6 749 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 KCNT1Q5JUK3 1230 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 FAM102AQ5T9C2 384 aaPredicted RBP11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 HHATQ5VTY9 493 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 FYB2Q5VWT5 728 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 KAZNQ674X7 775 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 MFSD7Q6UXD7 560 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 SERINC5Q86VE9 423 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 TTC30AQ86WT1 665 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 ATP11CQ8NB49 1132 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 OR6B3Q8NGW1 331 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 CD99L2Q8TCZ2 262 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 RMDN2Q96LZ7 410 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 SENP6Q9GZR1 1112 aaPredicted RBP11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 VPS37BQ9H9H4 285 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 ETNK1Q9HBU6 452 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 MLXIPLQ9NP71 852 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 DONSONQ9NYP3 566 aa11.48□□□□□ -0.57
SH3RF1-203ENST00000508685 A8MXQ7 604 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 TM9SF1O15321 606 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 EDF1O60869 148 aaKnown RBP11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 GRAP2O75791 330 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 KRT16P08779 473 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 PDGFRBP09619 1106 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 LMO2P25791 158 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 IL1R2P27930 398 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 GCAP28676 217 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 GABRB2P47870 512 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 SLC25A11Q02978 314 aaKnown RBP11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 SEPT7Q16181 437 aaKnown RBP11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 HADHQ16836 314 aaKnown RBP11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 SLC45A4Q5BKX6 768 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 PMF1Q6P1K2 205 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 PPIL6Q8IXY8 311 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 TTC39CQ8N584 583 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 FNIP1Q8TF40 1166 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 NSMCE1Q8WV22 266 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 MCRS1Q96EZ8 462 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 PWWP2AQ96N64 755 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 PAIP2Q9BPZ3 127 aaKnown RBP11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 FAM124BQ9H5Z6 455 aaPredicted RBP11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 ZWILCHQ9H900 591 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 SAR1AQ9NR31 198 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 WDR35Q9P2L0 1181 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 TRPV2Q9Y5S1 764 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 POC1B-GALNT4F8VUJ3 575 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 TRAFD1O14545 582 aaPredicted RBP11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 TYROBPO43914 113 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 CD4P01730 458 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 CCDC130P13994 396 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 CA4P22748 312 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 MLH1P40692 756 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 CDKN2BP42772 138 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 PLCB3Q01970 1234 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 SF3A3Q12874 501 aaKnown RBP eCLIP11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 PKN2Q16513 984 aaKnown RBP11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 HIF1AQ16665 826 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 PKDCCQ504Y2 493 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 RAB6CQ53S08 254 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 SH3PXD2AQ5TCZ1 1133 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 TRNP1Q6NT89 227 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms