RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 LSM7Q9UK45 103 aaKnown RBP9.59□□□□□ -0.87
NUP54-207ENST00000508583 LUC7L2Q9Y383 392 aaKnown RBP9.59□□□□□ -0.87
NUP54-207ENST00000508583 E2F8A0AVK6 867 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 NRG2O14511 850 aaPredicted RBP9.58□□□□□ -0.88
NUP54-207ENST00000508583 CAPN9O14815 690 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 PRAMEF12O95522 483 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 LTFP02788 710 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 PNMA6AP0CW24 399 aaPredicted RBP9.58□□□□□ -0.88
NUP54-207ENST00000508583 GLULP15104 373 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 GDI1P31150 447 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 SCNN1AP37088 669 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 PBX1P40424 430 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 VIPR2P41587 438 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 IFNAR2P48551 515 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 RGS7P49802 495 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 MLLT6P55198 1093 aaPredicted RBP9.58□□□□□ -0.88
NUP54-207ENST00000508583 DAOAP59103 153 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 ZBED6P86452 979 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 ARID5AQ03989 594 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 USP4Q13107 963 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 NR1H3Q13133 447 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 MTA1Q13330 715 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 MTF1Q14872 753 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 EFHC1Q5JVL4 640 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 VITQ6UXI7 678 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 NOP9Q86U38 636 aaKnown RBP9.58□□□□□ -0.88
NUP54-207ENST00000508583 ERICH1Q86X53 443 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 PASD1Q8IV76 773 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 SH3RF2Q8TEC5 729 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 RSAD2Q8WXG1 361 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 ATP2A3Q93084 1043 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 FAM149B1Q96BN6 582 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 OTUB2Q96DC9 234 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 TRIM5Q9C035 493 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 ACP6Q9NPH0 428 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 ZNHIT6Q9NWK9 470 aaKnown RBP9.58□□□□□ -0.88
NUP54-207ENST00000508583 ASNSD1Q9NWL6 643 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 AIPL1Q9NZN9 384 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 NOCTQ9UK39 431 aaKnown RBP9.58□□□□□ -0.88
NUP54-207ENST00000508583 ZNF510Q9Y2H8 683 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 SH3BP1Q9Y3L3 701 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 CPQQ9Y646 472 aa9.58□□□□□ -0.88
NUP54-207ENST00000508583 HELZP42694 1942 aaKnown RBP9.58□□□□□ -0.88
NUP54-207ENST00000508583 LRRC53A6NM62 1247 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 E5RJQ4 531 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 TULP2O00295 520 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 HSF2BPO75031 334 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 NFATC1O95644 943 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 CALB1P05937 261 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 MMEP08473 750 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 DESP17661 470 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 NSFP46459 744 aaKnown RBP9.57□□□□□ -0.88
NUP54-207ENST00000508583 PRKCQQ04759 706 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 KLHL30Q0D2K2 578 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 NNTQ13423 1086 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 ZNF77Q15935 545 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 TAF3Q5VWG9 929 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 BSPRYQ5W0U4 402 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 TRIM67Q6ZTA4 783 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 CPA6Q8N4T0 437 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 TTC16Q8NEE8 873 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 OSCP1Q8WVF1 389 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 DDX1Q92499 740 aaKnown RBP9.57□□□□□ -0.88
NUP54-207ENST00000508583 BAP1Q92560 729 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 C18orf8Q96DM3 657 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 CYP2S1Q96SQ9 504 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 AGPAT1Q99943 283 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 DCLK3Q9C098 648 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 TTYH3Q9C0H2 523 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 MFSD1Q9H3U5 465 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 SMOC2Q9H3U7 446 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 C8orf33Q9H7E9 229 aaPredicted RBP9.57□□□□□ -0.88
NUP54-207ENST00000508583 CCSER2Q9H7U1 834 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 POPDC2Q9HBU9 364 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 SEPT11Q9NVA2 429 aaKnown RBP9.57□□□□□ -0.88
NUP54-207ENST00000508583 RRN3Q9NYV6 651 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 MARCH2Q9P0N8 246 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 WDR35Q9P2L0 1181 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 CAPN11Q9UMQ6 739 aa9.57□□□□□ -0.88
NUP54-207ENST00000508583 MRPS17Q9Y2R5 130 aaKnown RBP9.57□□□□□ -0.88
NUP54-207ENST00000508583 CUL9Q8IWT3 2517 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 YJEFN3A6XGL0 299 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 E7ENQ6 273 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 LEFTY2O00292 366 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 MAN2B1O00754 1011 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 CALCAP01258 141 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 SERPING1P05155 500 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 CFHP08603 1231 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 NCAM1P13591 858 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 TNFAIP3P21580 790 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 PRKCIP41743 596 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 HARS2P49590 506 aaKnown RBP9.56□□□□□ -0.88
NUP54-207ENST00000508583 YWHAZP63104 245 aaKnown RBP9.56□□□□□ -0.88
NUP54-207ENST00000508583 NOMO3P69849 1222 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 GPC5P78333 572 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 FMO1Q01740 532 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 GRM2Q14416 872 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 ITPRIPL2Q3MIP1 535 aa9.56□□□□□ -0.88
NUP54-207ENST00000508583 PREPLQ4J6C6 727 aaPredicted RBP9.56□□□□□ -0.88
NUP54-207ENST00000508583 TDRD12Q587J7 1177 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms