RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 SNX30Q5VWJ9 437 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 EGFLAMQ63HQ2 1017 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 SDE2Q6IQ49 451 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 DYMQ7RTS9 669 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 TMPRSS7Q7RTY8 843 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 NUP93Q8N1F7 819 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 LSM14AQ8ND56 463 aaKnown RBP9.98□□□□□ -0.81
NEDD9-211ENST00000508546 RASSF8Q8NHQ8 419 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 DNASE2BQ8WZ79 361 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 FCRL3Q96P31 734 aaPredicted RBP9.98□□□□□ -0.81
NEDD9-211ENST00000508546 ELOVL4Q9GZR5 314 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 OLFML3Q9NRN5 406 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 TMEM30AQ9NV96 361 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 CYP8B1Q9UNU6 501 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 PCDHB13Q9Y5F0 798 aa9.98□□□□□ -0.81
NEDD9-211ENST00000508546 A0A1B0GTW7 788 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 GOLGA8IPA6NC78 632 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 GOLGA8JA6NMD2 632 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 TULP1O00294 542 aaPredicted RBP9.97□□□□□ -0.81
NEDD9-211ENST00000508546 GFRA2O00451 464 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 CACNG3O60359 315 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 TACC1O75410 805 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 RTN3O95197 1032 aaPredicted RBP9.97□□□□□ -0.81
NEDD9-211ENST00000508546 GCNT3O95395 438 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 TNNC2P02585 160 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 YWHAQP27348 245 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 GNL1P36915 607 aaPredicted RBP9.97□□□□□ -0.81
NEDD9-211ENST00000508546 WASP42768 502 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 CACNA2D1P54289 1103 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 GRIN1Q05586 938 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 SURF1Q15526 300 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 DUOXA2Q1HG44 320 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 ANO4Q32M45 955 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 HECTD3Q5T447 861 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 GRAMD4Q6IC98 578 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 DBX2Q6ZNG2 339 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 HS2ST1Q7LGA3 356 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 METTL3Q86U44 580 aaKnown RBP9.97□□□□□ -0.81
NEDD9-211ENST00000508546 TMEM25Q86YD3 366 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 BBS7Q8IWZ6 715 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 CHPFQ8IZ52 775 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 GPD1LQ8N335 351 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 OR5B17Q8NGF7 314 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 BAHD1Q8TBE0 780 aaPredicted RBP9.97□□□□□ -0.81
NEDD9-211ENST00000508546 DNAJC19Q96DA6 116 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 MRGPRX1Q96LB2 322 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 MMS19Q96T76 1030 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 ACOX2Q99424 681 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 CBWD1Q9BRT8 395 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 IL37Q9NZH6 218 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 STK17AQ9UEE5 414 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 SH3BP1Q9Y3L3 701 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 NME7Q9Y5B8 376 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 PTPRJQ12913 1337 aa9.97□□□□□ -0.81
NEDD9-211ENST00000508546 MYLKQ15746 1914 aa9.96□□□□□ -0.81
NEDD9-211ENST00000508546 TRIM24O15164 1050 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 CER1O95813 267 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 ZDHHC11BP0C7U3 371 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 PTPN1P18031 435 aaKnown RBP9.96□□□□□ -0.82
NEDD9-211ENST00000508546 MAOBP27338 520 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 CD6P30203 668 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 CASP5P51878 434 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 KCNC4Q03721 635 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 HTR3DQ70Z44 454 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 SYCP3Q8IZU3 236 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 GALNT15Q8N3T1 639 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 FAM181AQ8N9Y4 354 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 CADM4Q8NFZ8 388 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 FBXO32Q969P5 355 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 XPO6Q96QU8 1125 aaKnown RBP9.96□□□□□ -0.82
NEDD9-211ENST00000508546 CDC6Q99741 560 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 MRPL45Q9BRJ2 306 aaKnown RBP9.96□□□□□ -0.82
NEDD9-211ENST00000508546 ZNF518BQ9C0D4 1074 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 SNX25Q9H3E2 840 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 CD93Q9NPY3 652 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 DNAJC17Q9NVM6 304 aaKnown RBP9.96□□□□□ -0.82
NEDD9-211ENST00000508546 TOR4AQ9NXH8 423 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 WSB2Q9NYS7 404 aaPredicted RBP9.96□□□□□ -0.82
NEDD9-211ENST00000508546 MARK1Q9P0L2 795 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 TBC1D7Q9P0N9 293 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 PCDHGB2Q9Y5G2 931 aa9.96□□□□□ -0.82
NEDD9-211ENST00000508546 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.95□□□□□ -0.82
NEDD9-211ENST00000508546 FAM92AA1XBS5 289 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 FRMD3A2A2Y4 597 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 TRABD2BA6NFA1 517 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 ZNF233A6NK53 670 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 PRRT4C9JH25 899 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 H3BQV1 296 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 CAPN9O14815 690 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 FLRT2O43155 660 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 CILPO75339 1184 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 MATKP42679 507 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 ZNF132P52740 706 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 IFRD2Q12894 506 aaPredicted RBP9.95□□□□□ -0.82
NEDD9-211ENST00000508546 CAMK2BQ13554 666 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 IL27RAQ6UWB1 636 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 TRAPPC11Q7Z392 1133 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 WDR49Q8IV35 697 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 B3GALNT2Q8NCR0 500 aa9.95□□□□□ -0.82
NEDD9-211ENST00000508546 OR6B3Q8NGW1 331 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms