RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 NIPA1Q7RTP0 329 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 CCDC83Q8IWF9 413 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 CKAP2LQ8IYA6 745 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 UNC80Q8N2C7 3258 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 CELF2-AS1Q8N7Q2 184 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 ZNF713Q8N859 430 aaPredicted RBP5.1□□□□□ -1.59
NUP54-206ENST00000508465 PCDH19Q8TAB3 1148 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 CALML6Q8TD86 181 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 LMBR1Q8WVP7 490 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 HNRNPLLQ8WVV9 542 aaKnown RBP5.1□□□□□ -1.59
NUP54-206ENST00000508465 DNAJB3Q8WWF6 145 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 PTPRN2Q92932 1015 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 LENG9Q96B70 501 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 GUCD1Q96NT3 240 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 IPO9Q96P70 1041 aaKnown RBP5.1□□□□□ -1.59
NUP54-206ENST00000508465 CDX2Q99626 313 aaPredicted RBP5.1□□□□□ -1.59
NUP54-206ENST00000508465 FAM49AQ9H0Q0 323 aaPredicted RBP5.1□□□□□ -1.59
NUP54-206ENST00000508465 CERS4Q9HA82 394 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 ERAP1Q9NZ08 941 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 GPRC5BQ9NZH0 403 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 ZNF215Q9UL58 517 aaPredicted RBP5.1□□□□□ -1.59
NUP54-206ENST00000508465 LIMCH1Q9UPQ0 1083 aa5.1□□□□□ -1.59
NUP54-206ENST00000508465 SCN10AQ9Y5Y9 1956 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 LTBP2Q14767 1821 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 NFASCO94856 1347 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 A0A087WWV3 80 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 CCDC194A0A1B0GVG4 234 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 TMEM150BA6NC51 233 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 BTBD18B2RXH4 712 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 SLC37A4O43826 429 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 H2AFYO75367 372 aaKnown RBP5.09□□□□□ -1.59
NUP54-206ENST00000508465 MPIG6BO95866 241 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 SRGAP2CP0DJJ0 459 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 ATP2A2P16615 1042 aaKnown RBP5.09□□□□□ -1.59
NUP54-206ENST00000508465 IBSPP21815 317 aaPredicted RBP5.09□□□□□ -1.59
NUP54-206ENST00000508465 FBLP22087 321 aaKnown RBP5.09□□□□□ -1.59
NUP54-206ENST00000508465 KLRC1P26715 233 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 HOXC8P31273 242 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 CIITAP33076 1130 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 ADRA1BP35368 520 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 DEFB103AP81534 67 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 GUCY1A3Q02108 690 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 ARID5AQ03989 594 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 ADAM15Q13444 863 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 LETM2Q2VYF4 491 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 NAALADL2Q58DX5 795 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 YOD1Q5VVQ6 348 aaPredicted RBP5.09□□□□□ -1.59
NUP54-206ENST00000508465 PSRC1Q6PGN9 363 aaPredicted RBP5.09□□□□□ -1.59
NUP54-206ENST00000508465 PIK3AP1Q6ZUJ8 805 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 NSUN7Q8NE18 718 aaKnown RBP5.09□□□□□ -1.59
NUP54-206ENST00000508465 HIPK4Q8NE63 616 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 CCDC148Q8NFR7 591 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 DBF4BQ8NFT6 615 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 CAGE1Q8TC20 777 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 AFAP1L1Q8TED9 768 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 PPM1EQ8WY54 764 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 SLC5A5Q92911 643 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 GTF3C6Q969F1 213 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 TIFAQ96CG3 184 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 IL17RAQ96F46 866 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 NAF1Q96HR8 494 aaKnown RBP5.09□□□□□ -1.59
NUP54-206ENST00000508465 ZNF668Q96K58 619 aaPredicted RBP5.09□□□□□ -1.59
NUP54-206ENST00000508465 SH2D3AQ9BRG2 576 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 UNC45AQ9H3U1 944 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 PRDM12Q9H4Q4 367 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 AZI2Q9H6S1 392 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 GABBR1Q9UBS5 961 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 MSRAQ9UJ68 235 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 CBLCQ9ULV8 474 aa5.09□□□□□ -1.59
NUP54-206ENST00000508465 SCN5AQ14524 2016 aa5.09□□□□□ -1.6
NUP54-206ENST00000508465 TRANK1O15050 2925 aa5.09□□□□□ -1.6
NUP54-206ENST00000508465 TET1Q8NFU7 2136 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 CDH23Q9H251 3354 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 NRCAMQ92823 1304 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 CYP3A7-CYP3A51PA0A087WV96 503 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 IGKV6D-21A0A0A0MT36 114 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 LCHNA4D1U4 455 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 RRN3P2A6NIE6 340 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 MARCH6O60337 910 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 CCNT1O60563 726 aaKnown RBP5.08□□□□□ -1.6
NUP54-206ENST00000508465 EIF5BO60841 1220 aaKnown RBP5.08□□□□□ -1.6
NUP54-206ENST00000508465 GAS7O60861 476 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 CXCL10P02778 98 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 GHRP10912 638 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 ACTN1P12814 892 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 CYP3A7P24462 503 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 APEX1P27695 318 aaKnown RBP5.08□□□□□ -1.6
NUP54-206ENST00000508465 RFC2P35250 354 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 WDR5P61964 334 aaKnown RBP5.08□□□□□ -1.6
NUP54-206ENST00000508465 MRPS21P82921 87 aaKnown RBP5.08□□□□□ -1.6
NUP54-206ENST00000508465 ATP2C1P98194 919 aaPredicted RBP5.08□□□□□ -1.6
NUP54-206ENST00000508465 LPIN1Q14693 890 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 NONOQ15233 471 aaKnown RBP eCLIP5.08□□□□□ -1.6
NUP54-206ENST00000508465 UGCGQ16739 394 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 TMEM266Q2M3C6 531 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 Q4G0T1 1027 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 PLEKHG4Q58EX7 1191 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 LRCH2Q5VUJ6 765 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 FAM160B1Q5W0V3 765 aa5.08□□□□□ -1.6
NUP54-206ENST00000508465 MIS18BP1Q6P0N0 1132 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms