RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 L3MBTL1Q9Y468 752 aa15.1■□□□□ 0.01
DDX41-208ENST00000507955 KPNA7A9QM74 516 aa15.09■□□□□ 0.01
DDX41-208ENST00000507955 IGF2BP3O00425 579 aaKnown RBP eCLIP15.09■□□□□ 0.01
DDX41-208ENST00000507955 FAM155BO75949 473 aa15.09■□□□□ 0.01
DDX41-208ENST00000507955 BEST1O76090 585 aa15.09■□□□□ 0.01
DDX41-208ENST00000507955 NQO1P15559 274 aaKnown RBP15.09■□□□□ 0.01
DDX41-208ENST00000507955 CA4P22748 312 aa15.09■□□□□ 0.01
DDX41-208ENST00000507955 BCAR1P56945 870 aa15.09■□□□□ 0.01
DDX41-208ENST00000507955 SLC10A2Q12908 348 aaPredicted RBP15.09■□□□□ 0.01
DDX41-208ENST00000507955 BNIP1Q12981 228 aa15.09■□□□□ 0.01
DDX41-208ENST00000507955 KYAT1Q16773 422 aa15.09■□□□□ 0.01
DDX41-208ENST00000507955 CTU1Q7Z7A3 348 aaKnown RBP15.09■□□□□ 0.01
DDX41-208ENST00000507955 CCDC185Q8N715 623 aa15.09■□□□□ 0.01
DDX41-208ENST00000507955 FAF2Q96CS3 445 aa15.09■□□□□ 0.01
DDX41-208ENST00000507955 STAMBPL1Q96FJ0 436 aa15.09■□□□□ 0.01
DDX41-208ENST00000507955 FAXDC2Q96IV6 333 aa15.09■□□□□ 0.01
DDX41-208ENST00000507955 PAFAH2Q99487 392 aa15.09■□□□□ 0.01
DDX41-208ENST00000507955 FOXP3Q9BZS1 431 aa15.09■□□□□ 0.01
DDX41-208ENST00000507955 DHX35Q9H5Z1 703 aaKnown RBP15.09■□□□□ 0.01
DDX41-208ENST00000507955 SUN1O94901 812 aa15.09■□□□□ 0.01
DDX41-208ENST00000507955 ARHGEF18Q6ZSZ5 1173 aa15.09■□□□□ 0.01
DDX41-208ENST00000507955 ETNK2Q9NVF9 386 aa15.09■□□□□ 0.01
DDX41-208ENST00000507955 RRN3P2A6NIE6 340 aa15.08■□□□□ 0
DDX41-208ENST00000507955 KBTBD13C9JR72 458 aa15.08■□□□□ 0
DDX41-208ENST00000507955 STAU1O95793 577 aaKnown RBP15.08■□□□□ 0
DDX41-208ENST00000507955 KRT16P08779 473 aa15.08■□□□□ 0
DDX41-208ENST00000507955 ZNF865P0CJ78 1059 aaPredicted RBP15.08■□□□□ 0
DDX41-208ENST00000507955 NDUFV1P49821 464 aa15.08■□□□□ 0
DDX41-208ENST00000507955 GEMIN4P57678 1058 aaKnown RBP15.08■□□□□ 0
DDX41-208ENST00000507955 ACAP1Q15027 740 aa15.08■□□□□ 0
DDX41-208ENST00000507955 UBXN11Q5T124 520 aa15.08■□□□□ 0
DDX41-208ENST00000507955 PRPF39Q86UA1 669 aaKnown RBP15.08■□□□□ 0
DDX41-208ENST00000507955 PDIK1LQ8N165 341 aa15.08■□□□□ 0
DDX41-208ENST00000507955 PLEKHA5Q9HAU0 1116 aa15.08■□□□□ 0
DDX41-208ENST00000507955 RRAGCQ9HB90 399 aa15.08■□□□□ 0
DDX41-208ENST00000507955 CNTN3Q9P232 1028 aa15.08■□□□□ 0
DDX41-208ENST00000507955 KIAA1257Q9ULG3 409 aa15.08■□□□□ 0
DDX41-208ENST00000507955 SLC45A1Q9Y2W3 748 aa15.08■□□□□ 0
DDX41-208ENST00000507955 CFAP73A6NFT4 308 aa15.08■□□□□ 0
DDX41-208ENST00000507955 ASMTLO95671 621 aa15.08■□□□□ 0
DDX41-208ENST00000507955 SMAD1Q15797 465 aaKnown RBP15.08■□□□□ 0
DDX41-208ENST00000507955 CST9Q5W186 159 aa15.08■□□□□ 0
DDX41-208ENST00000507955 TLDC1Q6P9B6 456 aa15.08■□□□□ 0
DDX41-208ENST00000507955 PCGF5Q86SE9 256 aa15.08■□□□□ 0
DDX41-208ENST00000507955 OSTM1Q86WC4 334 aa15.08■□□□□ 0
DDX41-208ENST00000507955 FAM131BQ86XD5 332 aa15.08■□□□□ 0
DDX41-208ENST00000507955 NT5DC4Q86YG4 428 aa15.08■□□□□ 0
DDX41-208ENST00000507955 AGAP11Q8TF27 550 aa15.08■□□□□ 0
DDX41-208ENST00000507955 CFAP36Q96G28 342 aa15.08■□□□□ 0
DDX41-208ENST00000507955 SMC6Q96SB8 1091 aa15.08■□□□□ 0
DDX41-208ENST00000507955 PIH1D1Q9NWS0 290 aaKnown RBP15.08■□□□□ 0
DDX41-208ENST00000507955 ZMYND8Q9ULU4 1186 aaPredicted RBP15.08■□□□□ 0
DDX41-208ENST00000507955 ARL2BPQ9Y2Y0 163 aa15.08■□□□□ 0
DDX41-208ENST00000507955 TIMM13Q9Y5L4 95 aaPredicted RBP15.08■□□□□ 0
DDX41-208ENST00000507955 MYO18AQ92614 2054 aaKnown RBP15.07■□□□□ 0
DDX41-208ENST00000507955 SMIM35A0A1B0GVV1 85 aa15.07■□□□□ 0
DDX41-208ENST00000507955 MBLAC1A4D2B0 266 aaPredicted RBP15.07■□□□□ 0
DDX41-208ENST00000507955 MYADML2A6NDP7 307 aa15.07■□□□□ 0
DDX41-208ENST00000507955 PIRO00625 290 aa15.07■□□□□ 0
DDX41-208ENST00000507955 APRTP07741 180 aa15.07■□□□□ 0
DDX41-208ENST00000507955 ELF1P32519 619 aa15.07■□□□□ 0
DDX41-208ENST00000507955 GRIA1P42261 906 aa15.07■□□□□ 0
DDX41-208ENST00000507955 YWHAGP61981 247 aaKnown RBP eCLIP15.07■□□□□ 0
DDX41-208ENST00000507955 C2orf69Q8N8R5 385 aa15.07■□□□□ 0
DDX41-208ENST00000507955 ATP11CQ8NB49 1132 aa15.07■□□□□ 0
DDX41-208ENST00000507955 SMG8Q8ND04 991 aaKnown RBP15.07■□□□□ 0
DDX41-208ENST00000507955 DENND1AQ8TEH3 1009 aa15.07■□□□□ 0
DDX41-208ENST00000507955 N4BP2L2Q92802 583 aaPredicted RBP15.07■□□□□ 0
DDX41-208ENST00000507955 MAGEB18Q96M61 343 aa15.07■□□□□ 0
DDX41-208ENST00000507955 CEP41Q9BYV8 373 aa15.07■□□□□ 0
DDX41-208ENST00000507955 PSMC3IPQ9P2W1 217 aaPredicted RBP15.07■□□□□ 0
DDX41-208ENST00000507955 IPPQ9Y573 584 aa15.07■□□□□ 0
DDX41-208ENST00000507955 LAMA2P24043 3122 aaKnown RBP15.07■□□□□ 0
DDX41-208ENST00000507955 APOL1O14791 398 aa15.07■□□□□ 0
DDX41-208ENST00000507955 CYP2F1P24903 491 aa15.07■□□□□ 0
DDX41-208ENST00000507955 SLC8A1P32418 973 aa15.07■□□□□ 0
DDX41-208ENST00000507955 PSEN2P49810 448 aa15.07■□□□□ 0
DDX41-208ENST00000507955 RIPK1Q13546 671 aa15.07■□□□□ 0
DDX41-208ENST00000507955 KBTBD12Q3ZCT8 623 aa15.07■□□□□ 0
DDX41-208ENST00000507955 EFHC2Q5JST6 749 aa15.07■□□□□ 0
DDX41-208ENST00000507955 ECHDC2Q86YB7 292 aa15.07■□□□□ 0
DDX41-208ENST00000507955 FAM149B1Q96BN6 582 aa15.07■□□□□ 0
DDX41-208ENST00000507955 TBCBQ99426 244 aa15.07■□□□□ 0
DDX41-208ENST00000507955 PITPNM3Q9BZ71 974 aa15.07■□□□□ 0
DDX41-208ENST00000507955 TCRBV9S1A1TA0A576 114 aa15.06■□□□□ 0
DDX41-208ENST00000507955 RARBP10826 455 aa15.06■□□□□ 0
DDX41-208ENST00000507955 EZRP15311 586 aaKnown RBP15.06■□□□□ 0
DDX41-208ENST00000507955 AMPD1P23109 780 aa15.06■□□□□ 0
DDX41-208ENST00000507955 L1CAMP32004 1257 aa15.06■□□□□ 0
DDX41-208ENST00000507955 ADAM17P78536 824 aa15.06■□□□□ 0
DDX41-208ENST00000507955 RNASELQ05823 741 aaKnown RBP15.06■□□□□ 0
DDX41-208ENST00000507955 KCNJ11Q14654 390 aa15.06■□□□□ 0
DDX41-208ENST00000507955 BOLA3Q53S33 107 aa15.06■□□□□ 0
DDX41-208ENST00000507955 TWF2Q6IBS0 349 aaKnown RBP15.06■□□□□ 0
DDX41-208ENST00000507955 GIMAP7Q8NHV1 300 aa15.06■□□□□ 0
DDX41-208ENST00000507955 SNX25Q9H3E2 840 aa15.06■□□□□ 0
DDX41-208ENST00000507955 MTMR10Q9NXD2 777 aa15.06■□□□□ 0
DDX41-208ENST00000507955 SLC17A7Q9P2U7 560 aa15.06■□□□□ 0
DDX41-208ENST00000507955 UBQLN1Q9UMX0 589 aaKnown RBP15.06■□□□□ 0
DDX41-208ENST00000507955 SLC15A5A6NIM6 579 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms