RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 NMUR1Q9HB89 426 aa18.26■□□□□ 0.51
RNF4-209ENST00000507784 TLR8Q9NR97 1041 aaKnown RBP18.26■□□□□ 0.51
RNF4-209ENST00000507784 ABCC13Q9NSE7 274 aa18.26■□□□□ 0.51
RNF4-209ENST00000507784 IL37Q9NZH6 218 aa18.26■□□□□ 0.51
RNF4-209ENST00000507784 COX16Q9P0S2 106 aa18.26■□□□□ 0.51
RNF4-209ENST00000507784 FANCGO15287 622 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 FYNP06241 537 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 EPCAMP16422 314 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 PTPN9P43378 593 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 TAS2R40P59535 323 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 ACAP1Q15027 740 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 HADHQ16836 314 aaKnown RBP18.25■□□□□ 0.51
RNF4-209ENST00000507784 ZFYVE27Q5T4F4 411 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 SH3PXD2AQ5TCZ1 1133 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 DNAJB7Q7Z6W7 309 aaPredicted RBP18.25■□□□□ 0.51
RNF4-209ENST00000507784 UBL4BQ8N7F7 174 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 NIPA2Q8N8Q9 360 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 RNF139Q8WU17 664 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 FAM172AQ8WUF8 416 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 SLC22A17Q8WUG5 538 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 ZNF512Q96ME7 567 aaPredicted RBP18.25■□□□□ 0.51
RNF4-209ENST00000507784 TBCBQ99426 244 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 TLR10Q9BXR5 811 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 MAN1C1Q9NR34 630 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 PCSK1NQ9UHG2 260 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 ATG2AQ2TAZ0 1938 aa18.25■□□□□ 0.51
RNF4-209ENST00000507784 COL4A4P53420 1690 aaPredicted RBP18.25■□□□□ 0.51
RNF4-209ENST00000507784 MIF4GDA9UHW6 222 aaKnown RBP18.24■□□□□ 0.51
RNF4-209ENST00000507784 M0QYT0 321 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 CCL16O15467 120 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 RALAP11233 206 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 TFE3P19532 575 aaPredicted RBP18.24■□□□□ 0.51
RNF4-209ENST00000507784 CTNNA2P26232 953 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 NRIP1P48552 1158 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 PGFP49763 221 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 NME3Q13232 169 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 SLC25A52Q3SY17 297 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 RAB6CQ53S08 254 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 RSRC2Q7L4I2 434 aaKnown RBP18.24■□□□□ 0.51
RNF4-209ENST00000507784 RHOT1Q8IXI2 618 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 HES6Q96HZ4 224 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 TTLL2Q9BWV7 592 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 RAB6CQ9H0N0 254 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 PLEKHA4Q9H4M7 779 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 ZNF576Q9H609 170 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 IGFLR1Q9H665 355 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 FAM204AQ9H8W3 233 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 ZWILCHQ9H900 591 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 NUDT5Q9UKK9 219 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 ASB3Q9Y575 518 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 SAR1BQ9Y6B6 198 aa18.24■□□□□ 0.51
RNF4-209ENST00000507784 FAM92AA1XBS5 289 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 CCDC66A2RUB6 948 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 KCNK3O14649 394 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 DDX3YO15523 660 aaKnown RBP18.23■□□□□ 0.51
RNF4-209ENST00000507784 SRGAP2O75044 1071 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 RARGP13631 454 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 HMGA1P17096 107 aaKnown RBP18.23■□□□□ 0.51
RNF4-209ENST00000507784 MIPP30301 263 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 CXCR5P32302 372 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 PSEN1P49768 467 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 PITX1P78337 314 aaPredicted RBP18.23■□□□□ 0.51
RNF4-209ENST00000507784 DEUP1Q05D60 604 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 PAPD7Q5XG87 772 aaKnown RBP18.23■□□□□ 0.51
RNF4-209ENST00000507784 ELMSAN1Q6PJG2 1045 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 PDZD8Q8NEN9 1154 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 ADAM32Q8TC27 787 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 KRT35Q92764 455 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 PSMG2Q969U7 264 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 NPY6RQ99463 290 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 NCAPGQ9BPX3 1015 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 RRN3Q9NYV6 651 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 TRPM5Q9NZQ8 1165 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 UXTQ9UBK9 157 aaPredicted RBP18.23■□□□□ 0.51
RNF4-209ENST00000507784 SNX12Q9UMY4 172 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 COLQQ9Y215 455 aaPredicted RBP18.23■□□□□ 0.51
RNF4-209ENST00000507784 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.23■□□□□ 0.51
RNF4-209ENST00000507784 PCDHA3Q9Y5H8 950 aa18.23■□□□□ 0.51
RNF4-209ENST00000507784 PRPSAP2O60256 369 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 LRCH4O75427 683 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 ZMYND10O75800 440 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 TRUB2O95900 331 aaKnown RBP18.22■□□□□ 0.51
RNF4-209ENST00000507784 TCF4P15884 667 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 GBP1P32455 592 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 CTNNA1P35221 906 aaKnown RBP18.22■□□□□ 0.51
RNF4-209ENST00000507784 DUSP6Q16828 381 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 ODF2Q5BJF6 829 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 STRADAQ7RTN6 431 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 HS6ST3Q8IZP7 471 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 ARFGAP1Q8N6T3 406 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 DQX1Q8TE96 717 aaKnown RBP18.22■□□□□ 0.51
RNF4-209ENST00000507784 UBE2Q2Q8WVN8 375 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 CD101Q93033 1021 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 PPP2R3CQ969Q6 453 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 MRPL38Q96DV4 380 aaKnown RBP18.22■□□□□ 0.51
RNF4-209ENST00000507784 OSBPL9Q96SU4 736 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 OSER1Q9NX31 292 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 SFMBT1Q9UHJ3 866 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 DPP7Q9UHL4 492 aa18.22■□□□□ 0.51
RNF4-209ENST00000507784 PSTPIP1O43586 416 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms