RNA–Protein interactions for RNA: ENST00000507761.1

LINC01088-204, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 842 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-204ENST00000507761 EDC3Q96F86 508 aaKnown RBP4.39□□□□□ -1.71
LINC01088-204ENST00000507761 HIC2Q96JB3 615 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 FAM234AQ9H0X4 552 aa4.39□□□□□ -1.71
LINC01088-204ENST00000507761 TRIM43BA6NCK2 446 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 IGSF3O75054 1194 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 PIAS2O75928 621 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 MCM5P33992 734 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 CPA2P48052 419 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 ITGA8P53708 1063 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 SUMO3P55854 103 aaPredicted RBP4.38□□□□□ -1.71
LINC01088-204ENST00000507761 MCL1Q07820 350 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 MTX1Q13505 466 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 STIM1Q13586 685 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 ARHGEF7Q14155 803 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 TTF1Q15361 905 aaPredicted RBP4.38□□□□□ -1.71
LINC01088-204ENST00000507761 PFKFB3Q16875 520 aaPredicted RBP4.38□□□□□ -1.71
LINC01088-204ENST00000507761 DAB2IPQ5VWQ8 1189 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 TPH2Q8IWU9 490 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 MMP21Q8N119 569 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 PNPLA1Q8N8W4 532 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 IGFBPL1Q8WX77 278 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 TRIM43Q96BQ3 446 aaPredicted RBP4.38□□□□□ -1.71
LINC01088-204ENST00000507761 KAZALD1Q96I82 304 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 B3GNT5Q9BYG0 378 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 DHX36Q9H2U1 1008 aaKnown RBP4.38□□□□□ -1.71
LINC01088-204ENST00000507761 HIPK2Q9H2X6 1198 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 SACM1LQ9NTJ5 587 aa4.38□□□□□ -1.71
LINC01088-204ENST00000507761 NOP58Q9Y2X3 529 aaKnown RBP4.38□□□□□ -1.71
LINC01088-204ENST00000507761 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.38□□□□□ -1.71
LINC01088-204ENST00000507761 CAPN8A6NHC0 703 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 FYB1O15117 783 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 SMAD6O43541 496 aaKnown RBP4.37□□□□□ -1.71
LINC01088-204ENST00000507761 CD63P08962 238 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 PARP1P09874 1014 aaKnown RBP4.37□□□□□ -1.71
LINC01088-204ENST00000507761 ADRA1DP25100 572 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 DEUP1Q05D60 604 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 ST3GAL2Q16842 350 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 FAM110CQ1W6H9 321 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 OVCH2Q7RTZ1 564 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 VPS50Q96JG6 964 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 ZNF668Q96K58 619 aaPredicted RBP4.37□□□□□ -1.71
LINC01088-204ENST00000507761 STK31Q9BXU1 1019 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 TYW1Q9NV66 732 aaKnown RBP4.37□□□□□ -1.71
LINC01088-204ENST00000507761 STK32BQ9NY57 414 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 CPNE7Q9UBL6 633 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 HDAC9Q9UKV0 1011 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 ASAP1Q9ULH1 1129 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 RIMKLBQ9ULI2 386 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 FZD4Q9ULV1 537 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 USP19O94966 1318 aa4.37□□□□□ -1.71
LINC01088-204ENST00000507761 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.36□□□□□ -1.71
LINC01088-204ENST00000507761 ISM1B1AKI9 464 aa4.36□□□□□ -1.71
LINC01088-204ENST00000507761 AGPSO00116 658 aa4.36□□□□□ -1.71
LINC01088-204ENST00000507761 INPPL1O15357 1258 aa4.36□□□□□ -1.71
LINC01088-204ENST00000507761 AKAP10O43572 662 aa4.36□□□□□ -1.71
LINC01088-204ENST00000507761 CTNND1O60716 968 aaKnown RBP4.36□□□□□ -1.71
LINC01088-204ENST00000507761 MYBP10242 640 aa4.36□□□□□ -1.71
LINC01088-204ENST00000507761 GPC5P78333 572 aa4.36□□□□□ -1.71
LINC01088-204ENST00000507761 TXNL4AP83876 142 aaKnown RBP4.36□□□□□ -1.71
LINC01088-204ENST00000507761 STK3Q13188 491 aa4.36□□□□□ -1.71
LINC01088-204ENST00000507761 SLC29A2Q14542 456 aa4.36□□□□□ -1.71
LINC01088-204ENST00000507761 ZNF549Q6P9A3 640 aa4.36□□□□□ -1.71
LINC01088-204ENST00000507761 EPM2AIP1Q7L775 607 aaPredicted RBP4.36□□□□□ -1.71
LINC01088-204ENST00000507761 SMCR8Q8TEV9 937 aaPredicted RBP4.36□□□□□ -1.71
LINC01088-204ENST00000507761 NMD3Q96D46 503 aaKnown RBP4.36□□□□□ -1.71
LINC01088-204ENST00000507761 THOC3Q96J01 351 aaKnown RBP4.36□□□□□ -1.71
LINC01088-204ENST00000507761 RTFDC1Q9BY42 306 aaPredicted RBP4.36□□□□□ -1.71
LINC01088-204ENST00000507761 C22orf23Q9BZE7 217 aa4.36□□□□□ -1.71
LINC01088-204ENST00000507761 TMEM60Q9H2L4 133 aa4.36□□□□□ -1.71
LINC01088-204ENST00000507761 FAM83DQ9H4H8 585 aa4.36□□□□□ -1.71
LINC01088-204ENST00000507761 USP29Q9HBJ7 922 aa4.36□□□□□ -1.71
LINC01088-204ENST00000507761 ZBTB40Q9NUA8 1239 aa4.36□□□□□ -1.71
LINC01088-204ENST00000507761 STEAP1Q9UHE8 339 aa4.36□□□□□ -1.71
LINC01088-204ENST00000507761 AQP7P3A6NL99 342 aa4.35□□□□□ -1.71
LINC01088-204ENST00000507761 RFPL1O75677 317 aa4.35□□□□□ -1.71
LINC01088-204ENST00000507761 BRAFP15056 766 aa4.35□□□□□ -1.71
LINC01088-204ENST00000507761 ACVR2AP27037 513 aa4.35□□□□□ -1.71
LINC01088-204ENST00000507761 CPT1AP50416 773 aa4.35□□□□□ -1.71
LINC01088-204ENST00000507761 RAB27AP51159 221 aa4.35□□□□□ -1.71
LINC01088-204ENST00000507761 B4GALNT1Q00973 533 aa4.35□□□□□ -1.71
LINC01088-204ENST00000507761 EARS2Q5JPH6 523 aaKnown RBP4.35□□□□□ -1.71
LINC01088-204ENST00000507761 SWSAP1Q6NVH7 229 aa4.35□□□□□ -1.71
LINC01088-204ENST00000507761 ZNF793Q6ZN11 406 aa4.35□□□□□ -1.71
LINC01088-204ENST00000507761 USP49Q70CQ1 688 aa4.35□□□□□ -1.71
LINC01088-204ENST00000507761 METTL25Q8N6Q8 603 aa4.35□□□□□ -1.71
LINC01088-204ENST00000507761 C11orf44Q8N8P7 122 aa4.35□□□□□ -1.71
LINC01088-204ENST00000507761 FAM71DQ8N9W8 422 aa4.35□□□□□ -1.71
LINC01088-204ENST00000507761 WIPF2Q8TF74 440 aaPredicted RBP4.35□□□□□ -1.71
LINC01088-204ENST00000507761 NUAK2Q9H093 628 aa4.35□□□□□ -1.71
LINC01088-204ENST00000507761 ZCWPW1Q9H0M4 648 aa4.35□□□□□ -1.71
LINC01088-204ENST00000507761 SEMA4BQ9NPR2 832 aaPredicted RBP4.35□□□□□ -1.71
LINC01088-204ENST00000507761 RGS17Q9UGC6 210 aaPredicted RBP4.35□□□□□ -1.71
LINC01088-204ENST00000507761 AFF4Q9UHB7 1163 aaKnown RBP4.35□□□□□ -1.71
LINC01088-204ENST00000507761 IGLV5-39A0A0G2JS06 123 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 CFAP69A5D8W1 941 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 FAM227AF5H4B4 570 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 RAB27BO00194 218 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 FRS3O43559 492 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 SNX2O60749 519 aa4.34□□□□□ -1.71
LINC01088-204ENST00000507761 T-ENOLP0DO92 83 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms