RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 ZNF623O75123 536 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 TMEM63AO94886 807 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 TTC4O95801 387 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 L1CAMP32004 1257 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 CTCFP49711 727 aaPredicted RBP12.71□□□□□ -0.37
LIN54-206ENST00000506560 VEGFBP49765 207 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 SEC24CP53992 1094 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 GBE1Q04446 702 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 SLC10A2Q12908 348 aaPredicted RBP12.71□□□□□ -0.37
LIN54-206ENST00000506560 AUHQ13825 339 aaKnown RBP12.71□□□□□ -0.37
LIN54-206ENST00000506560 FAXCQ5TGI0 409 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 ZNF598Q86UK7 904 aaKnown RBP12.71□□□□□ -0.37
LIN54-206ENST00000506560 ECHDC2Q86YB7 292 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 CCDC13Q8IYE1 715 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 SH3TC2Q8TF17 1288 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 CPT1BQ92523 772 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 PRCCQ92733 491 aaPredicted RBP12.71□□□□□ -0.37
LIN54-206ENST00000506560 TLCD1Q96CP7 247 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 HSFY1Q96LI6 401 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 GLT1D1Q96MS3 346 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 WDR83Q9BRX9 315 aaKnown RBP12.71□□□□□ -0.37
LIN54-206ENST00000506560 PCDH9Q9HC56 1237 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 HCSTQ9UBK5 93 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 SLC12A6Q9UHW9 1150 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 TPX2Q9ULW0 747 aaKnown RBP12.71□□□□□ -0.37
LIN54-206ENST00000506560 EFR3BQ9Y2G0 817 aa12.71□□□□□ -0.37
LIN54-206ENST00000506560 DDHD2O94830 711 aa12.71□□□□□ -0.38
LIN54-206ENST00000506560 OR4Q2P0C623 313 aa12.71□□□□□ -0.38
LIN54-206ENST00000506560 USP17L7P0C7H9 530 aa12.71□□□□□ -0.38
LIN54-206ENST00000506560 SULT1E1P49888 294 aa12.71□□□□□ -0.38
LIN54-206ENST00000506560 MRPS5P82675 430 aaKnown RBP12.71□□□□□ -0.38
LIN54-206ENST00000506560 NOMO1Q15155 1222 aa12.71□□□□□ -0.38
LIN54-206ENST00000506560 ZSCAN26Q16670 478 aa12.71□□□□□ -0.38
LIN54-206ENST00000506560 CYP4X1Q8N118 509 aa12.71□□□□□ -0.38
LIN54-206ENST00000506560 CENPIQ92674 756 aaPredicted RBP12.71□□□□□ -0.38
LIN54-206ENST00000506560 TSPAN18Q96SJ8 248 aa12.71□□□□□ -0.38
LIN54-206ENST00000506560 MAK16Q9BXY0 300 aaKnown RBP12.71□□□□□ -0.38
LIN54-206ENST00000506560 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.71□□□□□ -0.38
LIN54-206ENST00000506560 AP4E1Q9UPM8 1137 aa12.71□□□□□ -0.38
LIN54-206ENST00000506560 TSC2P49815 1807 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 FAM200BP0CF97 657 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 GOT1P17174 413 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 PTPN9P43378 593 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 NME3Q13232 169 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 CLLU1OSQ5K130 101 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 SPDYCQ5MJ68 293 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 FNBP1LQ5T0N5 605 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 ERMARDQ5T6L9 678 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 ANKMY2Q8IV38 441 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 TP53INP2Q8IXH6 220 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 HACE1Q8IYU2 909 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 ZCCHC9Q8N567 271 aaKnown RBP12.7□□□□□ -0.38
LIN54-206ENST00000506560 RSAD2Q8WXG1 361 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 P3H4Q92791 437 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 MYLPFQ96A32 169 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 LRRC4Q9HBW1 653 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 H7C0C1 242 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 RASGRF2O14827 1237 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 AMPD1P23109 780 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 BDNFP23560 247 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 CYP2F1P24903 491 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 MAGEA4P43358 317 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 ATP5OP48047 213 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 BCAR1P56945 870 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 BOLA3Q53S33 107 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 AGBL2Q5U5Z8 902 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 DARS2Q6PI48 645 aaKnown RBP12.7□□□□□ -0.38
LIN54-206ENST00000506560 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.7□□□□□ -0.38
LIN54-206ENST00000506560 ZNF296Q8WUU4 475 aaPredicted RBP12.7□□□□□ -0.38
LIN54-206ENST00000506560 USP29Q9HBJ7 922 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 TMEM51Q9NW97 253 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 CWC15Q9P013 229 aaKnown RBP12.7□□□□□ -0.38
LIN54-206ENST00000506560 TBK1Q9UHD2 729 aa12.7□□□□□ -0.38
LIN54-206ENST00000506560 FARP1Q9Y4F1 1045 aaPredicted RBP12.7□□□□□ -0.38
LIN54-206ENST00000506560 MRPL42Q9Y6G3 142 aaKnown RBP12.7□□□□□ -0.38
LIN54-206ENST00000506560 HHLA1C9JL84 531 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 F5H423 210 aaPredicted RBP12.69□□□□□ -0.38
LIN54-206ENST00000506560 MCF2LO15068 1137 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 EIF3HO15372 352 aaKnown RBP eCLIP12.69□□□□□ -0.38
LIN54-206ENST00000506560 RBL1P28749 1068 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 MATKP42679 507 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 PGFP49763 221 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 GATMP50440 423 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 EIF3BP55884 814 aaKnown RBP12.69□□□□□ -0.38
LIN54-206ENST00000506560 YWHAZP63104 245 aaKnown RBP12.69□□□□□ -0.38
LIN54-206ENST00000506560 LMNB2Q03252 620 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 TRMT10CQ7L0Y3 403 aaKnown RBP12.69□□□□□ -0.38
LIN54-206ENST00000506560 ZDHHC17Q8IUH5 632 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 EDEM1Q92611 657 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 MRRFQ96E11 262 aaKnown RBP12.69□□□□□ -0.38
LIN54-206ENST00000506560 STARD7Q9NQZ5 370 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 PIGVQ9NUD9 493 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 DNAJB4Q9UDY4 337 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 PTCH2Q9Y6C5 1203 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 NUP205Q92621 2012 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 M0QYT0 321 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 RGS16O15492 202 aaPredicted RBP12.69□□□□□ -0.38
LIN54-206ENST00000506560 MDH1P40925 334 aaKnown RBP12.69□□□□□ -0.38
LIN54-206ENST00000506560 ACADSBP45954 432 aa12.69□□□□□ -0.38
LIN54-206ENST00000506560 BASP1P80723 227 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms