RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 OCA2Q04671 838 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 MAPK7Q13164 816 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 TUBB3Q13509 450 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 CSHL1Q14406 222 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 GRM4Q14833 912 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 DLGAP5Q15398 846 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 BTBD16Q32M84 506 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 TRIM60Q495X7 471 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 SPDYE7PQ495Y7 208 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 CD300EQ496F6 205 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 PDCD4Q53EL6 469 aaKnown RBP3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 RBM20Q5T481 1227 aaKnown RBP3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 GGNQ86UU5 652 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 CIR1Q86X95 450 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 FSTL5Q8N475 847 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 PCYOX1LQ8NBM8 494 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 TMEM171Q8WVE6 324 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 ATRIPQ8WXE1 791 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 FAM89AQ96GI7 184 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZBTB45Q96K62 511 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 OSBPL9Q96SU4 736 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 TTPALQ9BTX7 342 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 VPS16Q9H269 839 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 UNKLQ9H9P5 680 aaKnown RBP3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 NOD2Q9HC29 1040 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 NDUFAF4Q9P032 175 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 RAPGEFL1Q9UHV5 662 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 VPS51Q9UID3 782 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 KCNE5Q9UJ90 142 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 FPGT-TNNI3KV9GXZ4 949 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 AKNAQ7Z591 1439 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 XDHP47989 1333 aa3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 DENND4BO75064 1496 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZFYVE16Q7Z3T8 1539 aa3.65□□□□□ -1.82
TRAPPC11-205ENST00000506426 BCORL1Q5H9F3 1711 aa3.65□□□□□ -1.82
TRAPPC11-205ENST00000506426 POGZQ7Z3K3 1410 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 FAM90A18PA6NE21 464 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 FAM90A16PA6NEW6 464 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 FAM90A9PA6NNJ1 464 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 FAM90A5PA8MXJ8 464 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 TRIM24O15164 1050 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 FOXD2O60548 495 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 PPP6R2O75170 966 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 TAF5LO75529 589 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 LARGE1O95461 756 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 PLATP00750 562 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 LMNAP02545 664 aaKnown RBP3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 LDHCP07864 332 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 IFIT1P09914 478 aaKnown RBP3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 FAM90A15PP0C7V4 464 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 FAM90A14PP0C7W9 464 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 JUPP14923 745 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 CD19P15391 556 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 BMP7P18075 431 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 COMTP21964 271 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 YY1P25490 414 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 RBL1P28749 1068 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 ADORA2AP29274 412 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 SERPINA4P29622 427 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 NTSR1P30989 418 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 MCM2P49736 904 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 MTHFSP49914 203 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 TUBP50607 506 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 CDK7P50613 346 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 ADAM17P78536 824 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 TIAL1Q01085 375 aaKnown RBP eCLIP3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 CHRNDQ07001 517 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 ANKRD1Q15327 319 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 P3H1Q32P28 736 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 ZNF569Q5MCW4 686 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 L1TD1Q5T7N2 865 aaKnown RBP3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 TTC22Q5TAA0 569 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 MAP3K21Q5TCX8 1036 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 VPS53Q5VIR6 699 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 FAM180BQ6P0A1 224 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 GLB1LQ6UWU2 654 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 CLEC9AQ6UXN8 241 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 C1orf122Q6ZSJ8 110 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 GDF7Q7Z4P5 450 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 ANKS1BQ7Z6G8 1248 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 HEATR4Q86WZ0 1026 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 ADGRG5Q8IZF4 528 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 ABRAQ8N0Z2 381 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 TMEM132CQ8N3T6 1108 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 TSPYL6Q8N831 410 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 CEP70Q8NHQ1 597 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 SUN3Q8TAQ9 357 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 OSCP1Q8WVF1 389 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 HMGB4Q8WW32 186 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 HTRA1Q92743 480 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 FAM136AQ96C01 138 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 HVCN1Q96D96 273 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 BOD1Q96IK1 185 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 AMBRA1Q9C0C7 1298 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 CHODLQ9H9P2 273 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 G6PC2Q9NQR9 355 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 FSCN3Q9NQT6 498 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 IRAK4Q9NWZ3 460 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 TRPM5Q9NZQ8 1165 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 PI4KBQ9UBF8 816 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms