RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 CDH6P55285 790 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 HTRA4P83105 476 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 DR1Q01658 176 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 CCNG2Q16589 344 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 SMTNL2Q2TAL5 461 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 MGAT5BQ3V5L5 792 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 TMEM240Q5SV17 173 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 BSPRYQ5W0U4 402 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 TRNP1Q6NT89 227 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 AADACL2Q6P093 401 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 TMCO3Q6UWJ1 677 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 MFSD7Q6UXD7 560 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 GPRIN1Q7Z2K8 1008 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 MTERF4Q7Z6M4 381 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 MON1AQ86VX9 555 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 TMEM173Q86WV6 379 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 CCDC105Q8IYK2 499 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 RNF168Q8IYW5 571 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 ARFGAP1Q8N6T3 406 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 RNF139Q8WU17 664 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 BCL7CQ8WUZ0 217 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 TSC1Q92574 1164 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 NT5C3BQ969T7 300 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 PGAP3Q96FM1 320 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 NPY6RQ99463 290 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 RAD9AQ99638 391 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 C11orf84Q9BUA3 381 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 CALN1Q9BXU9 219 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 DDX47Q9H0S4 455 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 LRRC19Q9H756 370 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 FAM204AQ9H8W3 233 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 ARFGAP3Q9NP61 516 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 MRPL17Q9NRX2 175 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 AFF4Q9UHB7 1163 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 PCYOX1Q9UHG3 505 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 SCML2Q9UQR0 700 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 CDY1Q9Y6F8 540 aa12.54□□□□□ -0.4
POLR2J3-211ENST00000506060 ALPK3Q96L96 1907 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 YJEFN3A6XGL0 299 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 E7ENQ6 273 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 TNFRSF10BO14763 440 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 NDC80O14777 642 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 HEXIM1O94992 359 aaKnown RBP12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 ECEL1O95672 775 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 YWHAQP27348 245 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 IL1R2P27930 398 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 TNFRSF8P28908 595 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 ELF1P32519 619 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 OR1D2P34982 312 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 COILP38432 576 aaPredicted RBP12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 ARL4AP40617 200 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 HDAC4P56524 1084 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 YWHAGP61981 247 aaKnown RBP eCLIP12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 CUL1Q13616 776 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 ATP13A4Q4VNC1 1196 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 EFHC2Q5JST6 749 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 KAZNQ674X7 775 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 CCDC137Q6PK04 289 aaKnown RBP12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 PRSS55Q6UWB4 352 aaPredicted RBP12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 DENND5BQ6ZUT9 1274 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 BBS12Q6ZW61 710 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 C16orf59Q7L2K0 433 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 TAS1R1Q7RTX1 841 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 RFX6Q8HWS3 928 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 PRELID2Q8N945 189 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 EIF1ADQ8N9N8 165 aaKnown RBP12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 ATAD1Q8NBU5 361 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 SLC7A14Q8TBB6 771 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 HNRNPLLQ8WVV9 542 aaKnown RBP12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 RAPGEF5Q92565 580 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 B3GALT6Q96L58 329 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 PGLYRP2Q96PD5 576 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 SEPT5Q99719 369 aaPredicted RBP12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 HEMGNQ9BXL5 484 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 FAM114A2Q9NRY5 505 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 OLA1Q9NTK5 396 aaKnown RBP12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 TMEM30AQ9NV96 361 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 KLHL11Q9NVR0 708 aa12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 RCOR3Q9P2K3 495 aaPredicted RBP12.53□□□□□ -0.4
POLR2J3-211ENST00000506060 RAD51CO43502 376 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 TLL1O43897 1013 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 ZNF189O75820 626 aaPredicted RBP12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 TCF4P15884 667 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 H2AFXP16104 143 aaPredicted RBP12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 ATP2A2P16615 1042 aaKnown RBP12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 ROR1Q01973 937 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 GUCY2DQ02846 1103 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 IFRD2Q12894 506 aaPredicted RBP12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 NME3Q13232 169 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 KLF1Q13351 362 aaPredicted RBP12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 VEPH1Q14D04 833 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 TAZQ16635 292 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 KCNT1Q5JUK3 1230 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 SH3PXD2AQ5TCZ1 1133 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 DRICH1Q6PGQ1 229 aaPredicted RBP12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 RNF19BQ6ZMZ0 732 aa12.52□□□□□ -0.41
POLR2J3-211ENST00000506060 TADA2BQ86TJ2 420 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms