RNA–Protein interactions for RNA: ENST00000505214.1

AC055733.3-201, humanhuman

BASIC

Gene AC055733.3, Length 523 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055733.3-201ENST00000505214 BRD8Q9H0E9 1235 aa7.55□□□□□ -1.2
AC055733.3-201ENST00000505214 VPS11Q9H270 941 aa7.55□□□□□ -1.2
AC055733.3-201ENST00000505214 RNF39Q9H2S5 420 aa7.55□□□□□ -1.2
AC055733.3-201ENST00000505214 R3HDMLQ9H3Y0 253 aa7.55□□□□□ -1.2
AC055733.3-201ENST00000505214 NRDE2Q9H7Z3 1164 aa7.55□□□□□ -1.2
AC055733.3-201ENST00000505214 CHST12Q9NRB3 414 aa7.55□□□□□ -1.2
AC055733.3-201ENST00000505214 FGFR1OP2Q9NVK5 253 aa7.55□□□□□ -1.2
AC055733.3-201ENST00000505214 DNAJC17Q9NVM6 304 aaKnown RBP7.55□□□□□ -1.2
AC055733.3-201ENST00000505214 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.55□□□□□ -1.2
AC055733.3-201ENST00000505214 RABGEF1Q9UJ41 708 aa7.55□□□□□ -1.2
AC055733.3-201ENST00000505214 PIN4Q9Y237 131 aaKnown RBP7.55□□□□□ -1.2
AC055733.3-201ENST00000505214 CLEC11AQ9Y240 323 aa7.55□□□□□ -1.2
AC055733.3-201ENST00000505214 USH1CQ9Y6N9 552 aa7.55□□□□□ -1.2
AC055733.3-201ENST00000505214 PTPRDP23468 1912 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 SMIM28A0A1B0GU29 152 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 C17orf102A2RUQ5 167 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 POC1B-GALNT4F8VUJ3 575 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 AP3B1O00203 1094 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 NCAM2O15394 837 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 KCNN4O15554 427 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 DYNC1LI2O43237 492 aaPredicted RBP7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 PAPSS1O43252 624 aaPredicted RBP7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 TYROBPO43914 113 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 KRT38O76015 456 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 MT-ND3P03897 115 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 MYCNP04198 464 aaPredicted RBP7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 ZSCAN5DPP0CG00 497 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 NPR3P17342 541 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 TAC1P20366 129 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 GCAP28676 217 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 LHX1P48742 406 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 RASSF2P50749 326 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 RAB27AP51159 221 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 INHBEP58166 350 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 PDE4CQ08493 712 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 RIPK1Q13546 671 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 SOWAHAQ2M3V2 549 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 SLC25A52Q3SY17 297 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 BBS9Q3SYG4 887 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 TMEM63BQ5T3F8 832 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 ARMC3Q5W041 872 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 HEATR6Q6AI08 1181 aaKnown RBP7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 PMF1Q6P1K2 205 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 DLK2Q6UY11 383 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 FAM43BQ6ZT52 329 aaPredicted RBP7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 C3orf62Q6ZUJ4 267 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 CCDC91Q7Z6B0 441 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 SLC26A11Q86WA9 606 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 TTC30AQ86WT1 665 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 LRRC6Q86X45 466 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 UNC45BQ8IWX7 931 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 ADGRF2Q8IZF7 708 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 GLIS1Q8NBF1 620 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 B3GALNT2Q8NCR0 500 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 MGARPQ8TDB4 240 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 DENND1AQ8TEH3 1009 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 SLC44A1Q8WWI5 657 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 C18orf25Q96B23 403 aaPredicted RBP7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 ACSF2Q96CM8 615 aaPredicted RBP7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 APOPT1Q96IL0 206 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 ZNF668Q96K58 619 aaPredicted RBP7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 PPP1R2P1Q96PQ5 205 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 PEBP4Q96S96 227 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 OSMRQ99650 979 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 MRPL45Q9BRJ2 306 aaKnown RBP7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 TUBB6Q9BUF5 446 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 IQCGQ9H095 443 aaKnown RBP7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 FAM49AQ9H0Q0 323 aaPredicted RBP7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 NXF3Q9H4D5 531 aaKnown RBP7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 RAB6BQ9NRW1 208 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 SETD4Q9NVD3 440 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 SNTG2Q9NY99 539 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 CTNNAL1Q9UBT7 734 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 TJP2Q9UDY2 1190 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 TUBGCP4Q9UGJ1 667 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 TBK1Q9UHD2 729 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 AP4E1Q9UPM8 1137 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 PTCH2Q9Y6C5 1203 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 TEX264Q9Y6I9 313 aa7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 COL4A4P53420 1690 aaPredicted RBP7.54□□□□□ -1.2
AC055733.3-201ENST00000505214 MYO18AQ92614 2054 aaKnown RBP7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 FRMPD3Q5JV73 1810 aa7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 ERI2A8K979 691 aaKnown RBP7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 KLF11O14901 512 aa7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 CHUKO15111 745 aa7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 EDF1O60869 148 aaKnown RBP7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 RASSF9O75901 435 aa7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 TMEM63AO94886 807 aa7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 F9P00740 461 aa7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 CD48P09326 243 aa7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 SKIP12755 728 aa7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 AKR1A1P14550 325 aa7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 ETS1P14921 441 aa7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 PRKCHP24723 683 aa7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 CYP2F1P24903 491 aa7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 DNAJB2P25686 324 aa7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 PCSK1P29120 753 aa7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 RPL9P32969 192 aaKnown RBP7.53□□□□□ -1.2
AC055733.3-201ENST00000505214 HTR7P34969 479 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms