RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 NUDT2P50583 147 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 COPAP53621 1224 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 NLRP11P59045 1033 aaKnown RBP7.9□□□□□ -1.14
NEDD9-208ENST00000504387 NAA20P61599 178 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 MTMR1Q13613 665 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 MTERF2Q49AM1 385 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 FASTKD1Q53R41 847 aaKnown RBP7.9□□□□□ -1.14
NEDD9-208ENST00000504387 TFDP3Q5H9I0 405 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 CC2D2BQ6DHV5 1058 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 MON1BQ7L1V2 547 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 EEPD1Q7L9B9 569 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 KATNAL2Q8IYT4 538 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 RCOR2Q8IZ40 523 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 LARGE2Q8N3Y3 721 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 JOSD2Q8TAC2 188 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 CHURC1Q8WUH1 139 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 CRYGNQ8WXF5 182 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 DCUN1D1Q96GG9 259 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 HAPLN3Q96S86 360 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 IWS1Q96ST2 819 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 MXRA8Q9BRK3 442 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 APOBEC3GQ9HC16 384 aaKnown RBP7.9□□□□□ -1.14
NEDD9-208ENST00000504387 XAB2Q9HCS7 855 aaKnown RBP7.9□□□□□ -1.14
NEDD9-208ENST00000504387 MRPL47Q9HD33 250 aaKnown RBP7.9□□□□□ -1.14
NEDD9-208ENST00000504387 SEL1LQ9UBV2 794 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 ZC3H7BQ9UGR2 993 aaKnown RBP7.9□□□□□ -1.14
NEDD9-208ENST00000504387 SEPT9Q9UHD8 586 aaPredicted RBP7.9□□□□□ -1.14
NEDD9-208ENST00000504387 hCG_1818297A0A087WSY0 165 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 LRRIQ4A6NIV6 560 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 CAPN14A8MX76 684 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 POLRMTO00411 1230 aaKnown RBP7.9□□□□□ -1.14
NEDD9-208ENST00000504387 RAP1GDS1P52306 607 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 NOMO3P69849 1222 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 MRPS5P82675 430 aaKnown RBP7.9□□□□□ -1.14
NEDD9-208ENST00000504387 PLOD1Q02809 727 aaPredicted RBP7.9□□□□□ -1.14
NEDD9-208ENST00000504387 CYLC2Q14093 348 aaPredicted RBP7.9□□□□□ -1.14
NEDD9-208ENST00000504387 ANKRD20A4Q4UJ75 823 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 CMPK2Q5EBM0 449 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 ARHGEF16Q5VV41 709 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 KLHL35Q6PF15 583 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 APLFQ8IW19 511 aaPredicted RBP7.9□□□□□ -1.14
NEDD9-208ENST00000504387 MPP5Q8N3R9 675 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 LRGUKQ96M69 825 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 SMYD2Q9NRG4 433 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 BTBD7Q9P203 1132 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 CDH22Q9UJ99 828 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 ZNRF3Q9ULT6 936 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 TMCO1Q9UM00 188 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 AP4B1Q9Y6B7 739 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 IRS2Q9Y4H2 1338 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 CROCCQ5TZA2 2017 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 KCNN4O15554 427 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 MAGEC1O60732 1142 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 SETSIPP0DME0 302 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 CSH1P0DML2 217 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 CSH2P0DML3 217 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 IMPDH2P12268 514 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 RFX1P22670 979 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 CCR10P46092 362 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 DMP1Q13316 513 aaPredicted RBP7.9□□□□□ -1.15
NEDD9-208ENST00000504387 ATP1A4Q13733 1029 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 KRT72Q14CN4 511 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 DNAL1Q4LDG9 190 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 SLC44A4Q53GD3 710 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 SPDYAQ5MJ70 313 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 TDRD10Q5VZ19 366 aaKnown RBP7.9□□□□□ -1.15
NEDD9-208ENST00000504387 SLC39A4Q6P5W5 647 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 TDRPQ86YL5 185 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 OR5B17Q8NGF7 314 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 MZB1Q8WU39 189 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 ZNF606Q8WXB4 792 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 TMA16Q96EY4 203 aaKnown RBP7.9□□□□□ -1.15
NEDD9-208ENST00000504387 MBOAT7Q96N66 472 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 WDR55Q9H6Y2 383 aaPredicted RBP7.9□□□□□ -1.15
NEDD9-208ENST00000504387 ZNF277Q9NRM2 450 aaPredicted RBP7.9□□□□□ -1.15
NEDD9-208ENST00000504387 PARVAQ9NVD7 372 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 CLEC11AQ9Y240 323 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 HBS1LQ9Y450 684 aaKnown RBP7.9□□□□□ -1.15
NEDD9-208ENST00000504387 NUB1Q9Y5A7 615 aa7.9□□□□□ -1.15
NEDD9-208ENST00000504387 DLEC1Q9Y238 1755 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 PSTPIP1O43586 416 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 SIN3BO75182 1162 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 CRTAMO95727 393 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 OATP04181 439 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 NPR1P16066 1061 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 HOXA7P31268 230 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-208ENST00000504387 SLC5A2P31639 672 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 STIP1P31948 543 aaKnown RBP7.89□□□□□ -1.15
NEDD9-208ENST00000504387 FDFT1P37268 417 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 CDKN2BP42772 138 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 RAP1GAPP47736 663 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 LIG4P49917 911 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 ENTPD1P49961 510 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 CYP24A1Q07973 514 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 VPS72Q15906 364 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 WDR78Q5VTH9 848 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 ATG16L1Q676U5 607 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 GPAT2Q6NUI2 795 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 HHIPL2Q6UWX4 724 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 WDR75Q8IWA0 830 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms