RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 CD48P09326 243 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 CCDC130P13994 396 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 ADORA2BP29275 332 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 ARL4AP40617 200 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 HCAR3P49019 387 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 VPS41P49754 854 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 PRMT2P55345 433 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 DYNLT1P63172 113 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 ATP11AP98196 1134 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 CDK16Q00536 496 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 GUCY1A3Q02108 690 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 PRKCZQ05513 592 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 SCAPQ12770 1279 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 UPP1Q16831 310 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 TRIM71Q2Q1W2 868 aaKnown RBP10.2□□□□□ -0.78
COL1A1-210ENST00000504289 RAB41Q5JT25 222 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 WSCD1Q658N2 575 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 SCYL2Q6P3W7 929 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 DSTYKQ6XUX3 929 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 AGMOQ6ZNB7 445 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 YTHDF3Q7Z739 585 aaKnown RBP10.2□□□□□ -0.78
COL1A1-210ENST00000504289 OSTM1Q86WC4 334 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 SIX6OS1Q8N1H7 587 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 TMEM130Q8N3G9 435 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 PQLC3Q8N755 202 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 ATP11CQ8NB49 1132 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 MCUQ8NE86 351 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 MYCBPAPQ8TBZ2 947 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 CPT1BQ92523 772 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 ARHGEF2Q92974 986 aaKnown RBP10.2□□□□□ -0.78
COL1A1-210ENST00000504289 NTAN1Q96AB6 310 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 ACSF2Q96CM8 615 aaPredicted RBP10.2□□□□□ -0.78
COL1A1-210ENST00000504289 PIWIL1Q96J94 861 aaKnown RBP10.2□□□□□ -0.78
COL1A1-210ENST00000504289 XPO6Q96QU8 1125 aaKnown RBP10.2□□□□□ -0.78
COL1A1-210ENST00000504289 CCT8L2Q96SF2 557 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 GAD1Q99259 594 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 NPY6RQ99463 290 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 SYT15Q9BQS2 421 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 NRDE2Q9H7Z3 1164 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 POPDC2Q9HBU9 364 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 CSNK1G1Q9HCP0 422 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 SSU72Q9NP77 194 aaKnown RBP10.2□□□□□ -0.78
COL1A1-210ENST00000504289 SAYSD1Q9NPB0 183 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 EURLQ9NYK6 297 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 SRRDQ9UH36 339 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 PADI3Q9ULW8 664 aa10.2□□□□□ -0.78
COL1A1-210ENST00000504289 H3BRJ5 948 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 H7C0C1 242 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 PRKAR2AP13861 404 aaKnown RBP10.19□□□□□ -0.78
COL1A1-210ENST00000504289 TYMPP19971 482 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 THPOP40225 353 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 MLH1P40692 756 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 ATP5OP48047 213 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 RNASELQ05823 741 aaKnown RBP10.19□□□□□ -0.78
COL1A1-210ENST00000504289 ADCY1Q08828 1119 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 TUSC3Q13454 348 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 ITGA7Q13683 1181 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 TAF5Q15542 800 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 KLHL38Q2WGJ6 581 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 CCDC38Q502W7 563 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 SLC45A4Q5BKX6 768 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 SH3PXD2AQ5TCZ1 1133 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 DCLRE1AQ6PJP8 1040 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 CLEC20AQ6ZU45 233 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 PAQR9Q6ZVX9 377 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 PDZD4Q76G19 769 aaPredicted RBP10.19□□□□□ -0.78
COL1A1-210ENST00000504289 EXOC3L1Q86VI1 746 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 UNC45BQ8IWX7 931 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 FAM71DQ8N9W8 422 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 GLIS1Q8NBF1 620 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 PCDH19Q8TAB3 1148 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 EPS8L3Q8TE67 593 aaKnown RBP10.19□□□□□ -0.78
COL1A1-210ENST00000504289 APBB2Q92870 758 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 WNT8BQ93098 351 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 SMARCD1Q96GM5 515 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 ZFP42Q96MM3 310 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 FAM118BQ9BPY3 351 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 B3GNT5Q9BYG0 378 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 KLC2Q9H0B6 622 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 BRD8Q9H0E9 1235 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 USP29Q9HBJ7 922 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 GOLGA2P5Q9HBQ8 144 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 INTS9Q9NV88 658 aaKnown RBP10.19□□□□□ -0.78
COL1A1-210ENST00000504289 DDX43Q9NXZ2 648 aaKnown RBP10.19□□□□□ -0.78
COL1A1-210ENST00000504289 KANSL3Q9P2N6 904 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 DDX20Q9UHI6 824 aaKnown RBP10.19□□□□□ -0.78
COL1A1-210ENST00000504289 FZD10Q9ULW2 581 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 AP4E1Q9UPM8 1137 aa10.19□□□□□ -0.78
COL1A1-210ENST00000504289 CLUHO75153 1309 aa10.18□□□□□ -0.78
COL1A1-210ENST00000504289 EXOC1LA0A1B0GW35 172 aa10.18□□□□□ -0.78
COL1A1-210ENST00000504289 DCDC2CA8MYV0 355 aa10.18□□□□□ -0.78
COL1A1-210ENST00000504289 TMEM189-UBE2V1I3L0A0 370 aa10.18□□□□□ -0.78
COL1A1-210ENST00000504289 NCAM2O15394 837 aa10.18□□□□□ -0.78
COL1A1-210ENST00000504289 GRAP2O75791 330 aa10.18□□□□□ -0.78
COL1A1-210ENST00000504289 STK10O94804 968 aaKnown RBP10.18□□□□□ -0.78
COL1A1-210ENST00000504289 ZBED1O96006 694 aa10.18□□□□□ -0.78
COL1A1-210ENST00000504289 ZSCAN5DPP0CG00 497 aa10.18□□□□□ -0.78
COL1A1-210ENST00000504289 LCP1P13796 627 aa10.18□□□□□ -0.78
COL1A1-210ENST00000504289 CHN1P15882 459 aa10.18□□□□□ -0.78
COL1A1-210ENST00000504289 TPSB2P20231 275 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms