RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 GPR19Q15760 415 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 BAK1Q16611 211 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 ZNF827Q17R98 1081 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 LETM2Q2VYF4 491 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 URGCPQ8TCY9 931 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 DCAF11Q8TEB1 546 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 RAPGEF4Q8WZA2 1011 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 TTC9Q92623 222 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 PERPQ96FX8 193 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 INTS2Q9H0H0 1204 aaKnown RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 HEYLQ9NQ87 328 aaPredicted RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 NMRK1Q9NWW6 199 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 ZDHHC7Q9NXF8 308 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 ZNF70Q9UC06 446 aaPredicted RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 FAM153AQ9UHL3 310 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 NCAPD3P42695 1498 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 NPIPB15A6NHN6 443 aaPredicted RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 CTDSP2O14595 271 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 GDF9O60383 454 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 ARF4P18085 180 aaPredicted RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 FPR2P25090 351 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 RIPK4P57078 832 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 TRA2BP62995 288 aaKnown RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 FAM189BP81408 668 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 SLC44A4Q53GD3 710 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 ZNF628Q5EBL2 1059 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 SAMD5Q5TGI4 173 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 RINT1Q6NUQ1 792 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 LRSAM1Q6UWE0 723 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 BBS12Q6ZW61 710 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 ADCK1Q86TW2 530 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 ERMNQ8TAM6 284 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 SAT2Q96F10 170 aaPredicted RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 SH3GL2Q99962 352 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 IRX2Q9BZI1 471 aaPredicted RBP3.95□□□□□ -1.78
SUB1-202ENST00000502453 CHST8Q9H2A9 424 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 CHST7Q9NS84 486 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 TSPYL4Q9UJ04 414 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 CCPG1Q9ULG6 757 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 WDR37Q9Y2I8 494 aa3.95□□□□□ -1.78
SUB1-202ENST00000502453 ARHGEF11O15085 1522 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 NSD2O96028 1365 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 DISP3Q9P2K9 1392 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 LRRD1A4D1F6 860 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 SYN3O14994 580 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 EFSO43281 561 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 TGFB1I1O43294 461 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 PNPP00491 289 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 CHMLP26374 656 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 AVPR2P30518 371 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 ICAM3P32942 547 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 TCF7P36402 384 aaPredicted RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 MTIF2P46199 727 aaKnown RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 EIF4A1P60842 406 aaKnown RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 RNASELQ05823 741 aaKnown RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 NPRL3Q12980 569 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 MXD4Q14582 209 aaPredicted RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 IRF3Q14653 427 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 LRRC8DQ7L1W4 858 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 PHYKPLQ8IUZ5 450 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 ANKS4BQ8N8V4 417 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 BANPQ8N9N5 519 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 BBOF1Q8ND07 529 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 GMCL1P1Q8NEA9 526 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 OR56B2PQ8NGI1 322 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 FIBINQ8TAL6 211 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 ACMSDQ8TDX5 336 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 MRGPRX1Q96LB2 322 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 CMTM3Q96MX0 182 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 FAM111AQ96PZ2 611 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 RAB3IPQ96QF0 476 aaPredicted RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 TXN2Q99757 166 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 OSBPL10Q9BXB5 764 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 ARHGAP20Q9P2F6 1191 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 KCNK7Q9Y2U2 307 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 KCNE2Q9Y6J6 123 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 PASKQ96RG2 1323 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 A0A087WZ62 844 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 H7BY64 318 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 RNF225M0QZC1 329 aaPredicted RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 WDR46O15213 610 aaKnown RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 TP73O15350 636 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 B4GALT4O60513 344 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 PRDM1O75626 825 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 UPP2O95045 317 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 OPN1MWP04001 364 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 CELA3BP08861 270 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 FAM157BP0CG42 384 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 OPN1MW2P0DN77 364 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 OPN1MW3P0DN78 364 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 HOXD8P13378 290 aaPredicted RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 PTPN2P17706 415 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 PSMA4P25789 261 aaKnown RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 EPHA8P29322 1005 aaPredicted RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 NTF4P34130 210 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 MSX2P35548 267 aaPredicted RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 PBX3P40426 434 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 PIP4K2AP48426 406 aaPredicted RBP3.94□□□□□ -1.78
SUB1-202ENST00000502453 ACTR1AP61163 376 aa3.94□□□□□ -1.78
SUB1-202ENST00000502453 WDR43Q15061 677 aaKnown RBP eCLIP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms