RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 FGFBP2Q9BYJ0 223 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 ST6GALNAC4Q9H4F1 302 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 TM7SF3Q9NS93 570 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 INTS13Q9NVM9 706 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.69□□□□□ -0.86
CCDC171-209ENST00000498725 BTBD3Q9Y2F9 522 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 FNDC3AQ9Y2H6 1198 aaKnown RBP9.69□□□□□ -0.86
CCDC171-209ENST00000498725 NME7Q9Y5B8 376 aa9.69□□□□□ -0.86
CCDC171-209ENST00000498725 A0A1B0GTW7 788 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 PRRT4C9JH25 899 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 HOXC11O43248 304 aaPredicted RBP9.68□□□□□ -0.86
CCDC171-209ENST00000498725 CBFA2T3O75081 653 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 CILPO75339 1184 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 TYRP14679 529 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 CD6P30203 668 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 MATKP42679 507 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 C19orf57Q0VDD7 668 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 HLA-BQ31612 363 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 HECTD3Q5T447 861 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 DCAF12L1Q5VU92 463 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 DPH6Q7L8W6 267 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 TMPRSS7Q7RTY8 843 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 FAM124AQ86V42 546 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 NUP93Q8N1F7 819 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 GPD1LQ8N335 351 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 RDH13Q8NBN7 331 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 SCAMP5Q8TAC9 235 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 FOXJ1Q92949 421 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 OTUB2Q96DC9 234 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 XPO6Q96QU8 1125 aaKnown RBP9.68□□□□□ -0.86
CCDC171-209ENST00000498725 KCNK16Q96T55 309 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 B3GNT5Q9BYG0 378 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 OCEL1Q9H607 264 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 PLK2Q9NYY3 685 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 GMIPQ9P107 970 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 EIF2B4Q9UI10 523 aaKnown RBP9.68□□□□□ -0.86
CCDC171-209ENST00000498725 LAMA5O15230 3695 aa9.68□□□□□ -0.86
CCDC171-209ENST00000498725 MYLKQ15746 1914 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 A0A1B0GVT2 93 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 A8MXQ7 604 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 KCNJ18B7U540 433 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 KCNK3O14649 394 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 SLC26A4O43511 780 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 PPP1R37O75864 691 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 RTN3O95197 1032 aaPredicted RBP9.67□□□□□ -0.86
CCDC171-209ENST00000498725 CER1O95813 267 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 GARTP22102 1010 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 ITPKBP27987 946 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 LONP1P36776 959 aaKnown RBP9.67□□□□□ -0.86
CCDC171-209ENST00000498725 ABCG1P45844 678 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 CLDN6P56747 220 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 BNC1Q01954 994 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 USP49Q70CQ1 688 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 GLRX5Q86SX6 157 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 PDZD8Q8NEN9 1154 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 KCNV2Q8TDN2 545 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 ELMO3Q96BJ8 720 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 EPSTI1Q96J88 318 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 STRA6Q9BX79 667 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 ZDHHC5Q9C0B5 715 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 ELOVL4Q9GZR5 314 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 CD248Q9HCU0 757 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 TOR4AQ9NXH8 423 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 NXF1Q9UBU9 619 aaKnown RBP9.67□□□□□ -0.86
CCDC171-209ENST00000498725 KIF3AQ9Y496 699 aa9.67□□□□□ -0.86
CCDC171-209ENST00000498725 PLXNA2O75051 1894 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 PLK4O00444 970 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 BCAT2O15382 392 aaPredicted RBP9.66□□□□□ -0.86
CCDC171-209ENST00000498725 TBX18O95935 607 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 CST3P01034 146 aaPredicted RBP9.66□□□□□ -0.86
CCDC171-209ENST00000498725 DLATP10515 647 aaKnown RBP9.66□□□□□ -0.86
CCDC171-209ENST00000498725 GAP43P17677 238 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 GJB2P29033 226 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 DGKGP49619 791 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 CSNK1EP49674 416 aaKnown RBP9.66□□□□□ -0.86
CCDC171-209ENST00000498725 PGFP49763 221 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 TNNC1P63316 161 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 IL9RQ01113 521 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 DUOXA2Q1HG44 320 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 WDR72Q3MJ13 1102 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 FUT11Q495W5 492 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 DHRS13Q6UX07 377 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 TRAPPC11Q7Z392 1133 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 LIMS2Q7Z4I7 341 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 CBWD2Q8IUF1 395 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 KIAA1958Q8N8K9 716 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 B3GALNT2Q8NCR0 500 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 JAKMIP2Q96AA8 810 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 CEP295NLQ96MC4 621 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 UBL7Q96S82 380 aaPredicted RBP9.66□□□□□ -0.86
CCDC171-209ENST00000498725 GABRG3Q99928 467 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 PANK2Q9BZ23 570 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 WSB2Q9NYS7 404 aaPredicted RBP9.66□□□□□ -0.86
CCDC171-209ENST00000498725 KIAA1522Q9P206 1035 aaPredicted RBP9.66□□□□□ -0.86
CCDC171-209ENST00000498725 SEL1LQ9UBV2 794 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 STARD13Q9Y3M8 1113 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 STON1Q9Y6Q2 735 aa9.66□□□□□ -0.86
CCDC171-209ENST00000498725 URB1O60287 2271 aaKnown RBP9.65□□□□□ -0.86
CCDC171-209ENST00000498725 ZNF233A6NK53 670 aa9.65□□□□□ -0.86
CCDC171-209ENST00000498725 MDM4O15151 490 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms