RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ARMC5Q96C12 935 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 SNF8Q96H20 258 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 TOX2Q96NM4 488 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 CASD1Q96PB1 797 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 PKMYT1Q99640 499 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 ZNF670Q9BS34 389 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 FAM129AQ9BZQ8 928 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 RAB6CQ9H0N0 254 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 C11orf49Q9H6J7 331 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 NRDE2Q9H7Z3 1164 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 PNPLA8Q9NP80 782 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 CNGB3Q9NQW8 809 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 TMEM30AQ9NV96 361 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 TMLHEQ9NVH6 421 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 GPATCH2LQ9NWQ4 482 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 MARCH5Q9NX47 278 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 OGFRQ9NZT2 677 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 HCSTQ9UBK5 93 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 MTRF1LQ9UGC7 380 aaKnown RBP8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 AP4E1Q9UPM8 1137 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 EFR3BQ9Y2G0 817 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 SYNJ2BP-COX16A0A087WUM0 186 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 GOLGA6BA6NDN3 693 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 ENPP3O14638 875 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 CAPN9O14815 690 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 MCF2LO15068 1137 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 CST8O60676 142 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 TADA2AO75478 443 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 LTFP02788 710 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 OR4Q2P0C623 313 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 FAM153BP0C7A2 387 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 CPB1P15086 417 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 TFE3P19532 575 aaPredicted RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 OAS2P29728 719 aaKnown RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 RDXP35241 583 aaKnown RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 HSPA9P38646 679 aaKnown RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 RPL21P46778 160 aaKnown RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 SLC11A1P49279 550 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 VPS41P49754 854 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 OTUD4Q01804 1114 aaKnown RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 LMNB2Q03252 620 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 ADCY2Q08462 1091 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 IFRD2Q12894 506 aaPredicted RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 ELAVL2Q12926 359 aaKnown RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 CALCOCO2Q13137 446 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 MTMR3Q13615 1198 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 BYSLQ13895 437 aaKnown RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 TFDP2Q14188 446 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 PDK2Q15119 407 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 TRADDQ15628 312 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 TAZQ16635 292 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 KCTD19Q17RG1 926 aaPredicted RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 FAM153CQ494X1 144 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 SLC39A12Q504Y0 691 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 HSP90B2PQ58FF3 399 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 DCAF6Q58WW2 860 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 RAB41Q5JT25 222 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 VARS2Q5ST30 1063 aaKnown RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 C1orf53Q5VUE5 145 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 OTUD1Q5VV17 481 aaPredicted RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 FUT10Q6P4F1 479 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 FAM171BQ6P995 826 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 GSTA5Q7RTV2 222 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 VSIG1Q86XK7 387 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 MAP7D3Q8IWC1 876 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 DCP1BQ8IZD4 617 aaKnown RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 TSEN2Q8NCE0 465 aaKnown RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 KHSRPQ92945 711 aaKnown RBP eCLIP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 LRRC45Q96CN5 670 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 SLC2A13Q96QE2 648 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 TMEM175Q9BSA9 504 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 C11orf84Q9BUA3 381 aaPredicted RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 DDX23Q9BUQ8 820 aaKnown RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 TRIM62Q9BVG3 475 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 COLEC11Q9BWP8 271 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 FRMD8P1Q9BZ68 369 aaPredicted RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 ZCWPW1Q9H0M4 648 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 DHX35Q9H5Z1 703 aaKnown RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 FAM204AQ9H8W3 233 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 POPDC2Q9HBU9 364 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 PCDH18Q9HCL0 1135 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 CSNK1G1Q9HCP0 422 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 PRDM5Q9NQX1 630 aaPredicted RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 TMEM39AQ9NV64 488 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 ABI2Q9NYB9 513 aaPredicted RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 GRHL1Q9NZI5 618 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 COX16Q9P0S2 106 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 FAM153AQ9UHL3 310 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 DNPEPQ9ULA0 475 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 SNX24Q9Y343 169 aa8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 NUP210Q8TEM1 1887 aaPredicted RBP8.42□□□□□ -1.06
PDZRN3-212ENST00000498048 OR6C75A6NL08 312 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 ZNF487B1APH4 448 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 HHLA1C9JL84 531 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 APOC4-APOC2K7ER74 178 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 SGK1O00141 431 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 NRP1O14786 923 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 APOL1O14791 398 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 TRIM66O15016 1216 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms