RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 TTBK1Q5TCY1 1321 aaPredicted RBP4.72□□□□□ -1.65
SMC4-227ENST00000497984 LOC102723971A0A1B0GUV8 181 aa4.72□□□□□ -1.65
SMC4-227ENST00000497984 MBD3L4A6NDZ8 208 aaPredicted RBP4.72□□□□□ -1.65
SMC4-227ENST00000497984 MBD3L3A6NE82 208 aaPredicted RBP4.72□□□□□ -1.65
SMC4-227ENST00000497984 RGS10O43665 173 aa4.72□□□□□ -1.65
SMC4-227ENST00000497984 GPC5P78333 572 aa4.72□□□□□ -1.65
SMC4-227ENST00000497984 ANO6Q4KMQ2 910 aa4.72□□□□□ -1.65
SMC4-227ENST00000497984 CC2D1BQ5T0F9 858 aaKnown RBP4.72□□□□□ -1.65
SMC4-227ENST00000497984 ZCRB1Q8TBF4 217 aaKnown RBP4.72□□□□□ -1.65
SMC4-227ENST00000497984 CTAGE1Q96RT6 745 aa4.72□□□□□ -1.65
SMC4-227ENST00000497984 KRTAP4-4Q9BYR3 166 aa4.72□□□□□ -1.65
SMC4-227ENST00000497984 SEMA4BQ9NPR2 832 aaPredicted RBP4.72□□□□□ -1.65
SMC4-227ENST00000497984 RIMKLBQ9ULI2 386 aa4.72□□□□□ -1.65
SMC4-227ENST00000497984 USP19O94966 1318 aa4.72□□□□□ -1.65
SMC4-227ENST00000497984 TRIM43BA6NCK2 446 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 A8MVJ9 347 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 FYB1O15117 783 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 TUSC2O75896 110 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 HSPA6P17066 643 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 TACR3P29371 465 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 SLC7A1P30825 629 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 PTDSS1P48651 473 aaKnown RBP4.71□□□□□ -1.66
SMC4-227ENST00000497984 GATMP50440 423 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 PGDP52209 483 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 STIM1Q13586 685 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 DAB2IPQ5VWQ8 1189 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 SWSAP1Q6NVH7 229 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 LVRNQ6Q4G3 990 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 NPNTQ6UXI9 565 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 PNPLA1Q8N8W4 532 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 ZBTB34Q8NCN2 500 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 TRIM43Q96BQ3 446 aaPredicted RBP4.71□□□□□ -1.66
SMC4-227ENST00000497984 TM2D2Q9BX73 214 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 MLXIPQ9HAP2 919 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 MLXIPLQ9NP71 852 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 SEMA5BQ9P283 1151 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 FZD4Q9ULV1 537 aa4.71□□□□□ -1.66
SMC4-227ENST00000497984 PYCARD-AS1I3L0S3 204 aa4.7□□□□□ -1.66
SMC4-227ENST00000497984 RRHO14718 337 aa4.7□□□□□ -1.66
SMC4-227ENST00000497984 PARP1P09874 1014 aaKnown RBP4.7□□□□□ -1.66
SMC4-227ENST00000497984 CT47B1P0C2W7 299 aaPredicted RBP4.7□□□□□ -1.66
SMC4-227ENST00000497984 KLRC1P26715 233 aa4.7□□□□□ -1.66
SMC4-227ENST00000497984 CDKN2AP42771 156 aaKnown RBP4.7□□□□□ -1.66
SMC4-227ENST00000497984 CPA2P48052 419 aa4.7□□□□□ -1.66
SMC4-227ENST00000497984 ITGA8P53708 1063 aa4.7□□□□□ -1.66
SMC4-227ENST00000497984 B4GALNT1Q00973 533 aa4.7□□□□□ -1.66
SMC4-227ENST00000497984 EARS2Q5JPH6 523 aaKnown RBP4.7□□□□□ -1.66
SMC4-227ENST00000497984 USP49Q70CQ1 688 aa4.7□□□□□ -1.66
SMC4-227ENST00000497984 MAEAQ7L5Y9 396 aa4.7□□□□□ -1.66
SMC4-227ENST00000497984 OVCH2Q7RTZ1 564 aa4.7□□□□□ -1.66
SMC4-227ENST00000497984 C16orf71Q8IYS4 520 aaPredicted RBP4.7□□□□□ -1.66
SMC4-227ENST00000497984 THOC3Q96J01 351 aaKnown RBP4.7□□□□□ -1.66
SMC4-227ENST00000497984 B3GNT5Q9BYG0 378 aa4.7□□□□□ -1.66
SMC4-227ENST00000497984 C22orf23Q9BZE7 217 aa4.7□□□□□ -1.66
SMC4-227ENST00000497984 DHX36Q9H2U1 1008 aaKnown RBP4.7□□□□□ -1.66
SMC4-227ENST00000497984 TMEM8AQ9HCN3 771 aa4.7□□□□□ -1.66
SMC4-227ENST00000497984 NKX1-2Q9UD57 310 aaPredicted RBP4.7□□□□□ -1.66
SMC4-227ENST00000497984 PROCRQ9UNN8 238 aa4.7□□□□□ -1.66
SMC4-227ENST00000497984 IGLV5-39A0A0G2JS06 123 aa4.69□□□□□ -1.66
SMC4-227ENST00000497984 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.69□□□□□ -1.66
SMC4-227ENST00000497984 C2CD4BA6NLJ0 364 aa4.69□□□□□ -1.66
SMC4-227ENST00000497984 INPPL1O15357 1258 aa4.69□□□□□ -1.66
SMC4-227ENST00000497984 PRAMEF2O60811 474 aa4.69□□□□□ -1.66
SMC4-227ENST00000497984 ADRA1DP25100 572 aa4.69□□□□□ -1.66
SMC4-227ENST00000497984 SUMO3P55854 103 aaPredicted RBP4.69□□□□□ -1.66
SMC4-227ENST00000497984 MCL1Q07820 350 aa4.69□□□□□ -1.66
SMC4-227ENST00000497984 PIN1Q13526 163 aaPredicted RBP4.69□□□□□ -1.66
SMC4-227ENST00000497984 ARHGEF7Q14155 803 aa4.69□□□□□ -1.66
SMC4-227ENST00000497984 KPNB1Q14974 876 aaKnown RBP4.69□□□□□ -1.66
SMC4-227ENST00000497984 ZNF793Q6ZN11 406 aa4.69□□□□□ -1.66
SMC4-227ENST00000497984 TPH2Q8IWU9 490 aa4.69□□□□□ -1.66
SMC4-227ENST00000497984 NMD3Q96D46 503 aaKnown RBP4.69□□□□□ -1.66
SMC4-227ENST00000497984 SUCLG2Q96I99 432 aa4.69□□□□□ -1.66
SMC4-227ENST00000497984 LRGUKQ96M69 825 aa4.69□□□□□ -1.66
SMC4-227ENST00000497984 RTFDC1Q9BY42 306 aaPredicted RBP4.69□□□□□ -1.66
SMC4-227ENST00000497984 CPNE7Q9UBL6 633 aa4.69□□□□□ -1.66
SMC4-227ENST00000497984 TCF20Q9UGU0 1960 aaKnown RBP4.68□□□□□ -1.66
SMC4-227ENST00000497984 PIAS2O75928 621 aa4.68□□□□□ -1.66
SMC4-227ENST00000497984 PLAUP00749 431 aa4.68□□□□□ -1.66
SMC4-227ENST00000497984 MYBP10242 640 aa4.68□□□□□ -1.66
SMC4-227ENST00000497984 CD19P15391 556 aa4.68□□□□□ -1.66
SMC4-227ENST00000497984 PFKFB3Q16875 520 aaPredicted RBP4.68□□□□□ -1.66
SMC4-227ENST00000497984 FAM110CQ1W6H9 321 aa4.68□□□□□ -1.66
SMC4-227ENST00000497984 EPM2AIP1Q7L775 607 aaPredicted RBP4.68□□□□□ -1.66
SMC4-227ENST00000497984 ADHFE1Q8IWW8 467 aa4.68□□□□□ -1.66
SMC4-227ENST00000497984 C11orf44Q8N8P7 122 aa4.68□□□□□ -1.66
SMC4-227ENST00000497984 NGDNQ8NEJ9 315 aaKnown RBP4.68□□□□□ -1.66
SMC4-227ENST00000497984 B4GALNT2Q8NHY0 566 aa4.68□□□□□ -1.66
SMC4-227ENST00000497984 JPH3Q8WXH2 748 aaPredicted RBP4.68□□□□□ -1.66
SMC4-227ENST00000497984 TRMT61AQ96FX7 289 aaKnown RBP4.68□□□□□ -1.66
SMC4-227ENST00000497984 SCNM1Q9BWG6 230 aa4.68□□□□□ -1.66
SMC4-227ENST00000497984 USP29Q9HBJ7 922 aa4.68□□□□□ -1.66
SMC4-227ENST00000497984 AGO4Q9HCK5 861 aaKnown RBP4.68□□□□□ -1.66
SMC4-227ENST00000497984 RGS17Q9UGC6 210 aaPredicted RBP4.68□□□□□ -1.66
SMC4-227ENST00000497984 C4orf47A7E2U8 309 aa4.67□□□□□ -1.66
SMC4-227ENST00000497984 ZNF814B7Z6K7 855 aa4.67□□□□□ -1.66
SMC4-227ENST00000497984 PRSS44E7EML9 344 aa4.67□□□□□ -1.66
SMC4-227ENST00000497984 ALDH1L1O75891 902 aa4.67□□□□□ -1.66
SMC4-227ENST00000497984 RASSF9O75901 435 aa4.67□□□□□ -1.66
SMC4-227ENST00000497984 MBPP02686 304 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms