RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 RARGP13631 454 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 PRKCSHP14314 528 aaPredicted RBP16.13■□□□□ 0.17
NUP50-219ENST00000497960 EEF1GP26641 437 aaKnown RBP16.13■□□□□ 0.17
NUP50-219ENST00000497960 ZNF445P59923 1031 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 MAN2A1Q16706 1144 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 GOLGA7BQ2TAP0 167 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 TCP11X2Q5H9J9 407 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 CDKAL1Q5VV42 579 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 NAIF1Q69YI7 327 aaPredicted RBP16.13■□□□□ 0.17
NUP50-219ENST00000497960 KLHDC10Q6PID8 442 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 TMEM270Q6UE05 265 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 PIGZQ86VD9 579 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 IRF2BP1Q8IU81 584 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 ARHGAP18Q8N392 663 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 EHBP1Q8NDI1 1231 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 CDK5RAP1Q96SZ6 601 aaKnown RBP16.13■□□□□ 0.17
NUP50-219ENST00000497960 HINFPQ9BQA5 517 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 FANCLQ9NW38 375 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 DNMT3LQ9UJW3 386 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 TSPAN16Q9UKR8 245 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 PCDHB4Q9Y5E5 795 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 USP3Q9Y6I4 520 aa16.13■□□□□ 0.17
NUP50-219ENST00000497960 OTOGLQ3ZCN5 2332 aa16.12■□□□□ 0.17
NUP50-219ENST00000497960 GOLGA6L19H0YKK7 550 aa16.12■□□□□ 0.17
NUP50-219ENST00000497960 PAEPP09466 180 aa16.12■□□□□ 0.17
NUP50-219ENST00000497960 IRF1P10914 325 aa16.12■□□□□ 0.17
NUP50-219ENST00000497960 CDK11BP21127 795 aaKnown RBP16.12■□□□□ 0.17
NUP50-219ENST00000497960 BCAT1P54687 386 aa16.12■□□□□ 0.17
NUP50-219ENST00000497960 NCAPHQ15003 741 aa16.12■□□□□ 0.17
NUP50-219ENST00000497960 C10orf120Q5SQS8 335 aa16.12■□□□□ 0.17
NUP50-219ENST00000497960 RHBDF2Q6PJF5 856 aa16.12■□□□□ 0.17
NUP50-219ENST00000497960 UBR7Q8N806 425 aa16.12■□□□□ 0.17
NUP50-219ENST00000497960 LMO3Q8TAP4 145 aa16.12■□□□□ 0.17
NUP50-219ENST00000497960 TUBGCP2Q9BSJ2 902 aa16.12■□□□□ 0.17
NUP50-219ENST00000497960 KLF16Q9BXK1 252 aaPredicted RBP16.12■□□□□ 0.17
NUP50-219ENST00000497960 NMUR1Q9HB89 426 aa16.12■□□□□ 0.17
NUP50-219ENST00000497960 LRRC4Q9HBW1 653 aa16.12■□□□□ 0.17
NUP50-219ENST00000497960 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.12■□□□□ 0.17
NUP50-219ENST00000497960 OSER1Q9NX31 292 aa16.12■□□□□ 0.17
NUP50-219ENST00000497960 TAB2Q9NYJ8 693 aa16.12■□□□□ 0.17
NUP50-219ENST00000497960 LSM7Q9UK45 103 aaKnown RBP16.12■□□□□ 0.17
NUP50-219ENST00000497960 SLC8A2Q9UPR5 921 aa16.12■□□□□ 0.17
NUP50-219ENST00000497960 CHURC1-FNTBB4DL54 471 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 K7ESF4 209 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 XPO1O14980 1071 aaKnown RBP16.11■□□□□ 0.17
NUP50-219ENST00000497960 ADH5P11766 374 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 HOXA6P31267 233 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 OPRD1P41143 372 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 PLA2G4AP47712 749 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 FNTBP49356 437 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 GCNT1Q02742 428 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 GAD2Q05329 585 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 PDE4CQ08493 712 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 BST2Q10589 180 aaKnown RBP16.11■□□□□ 0.17
NUP50-219ENST00000497960 IQCB1Q15051 598 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 LY6G5CQ5SRR4 150 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 BTBD8Q5XKL5 378 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 HEATR6Q6AI08 1181 aaKnown RBP16.11■□□□□ 0.17
NUP50-219ENST00000497960 RRAGAQ7L523 313 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 SCD5Q86SK9 330 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 LUZP1Q86V48 1076 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 LONP2Q86WA8 852 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 TTC30AQ86WT1 665 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 BBS7Q8IWZ6 715 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 SUMF1Q8NBK3 374 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 INTS2Q9H0H0 1204 aaKnown RBP16.11■□□□□ 0.17
NUP50-219ENST00000497960 EPC1Q9H2F5 836 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 CLIC5Q9NZA1 410 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 RAB23Q9ULC3 237 aa16.11■□□□□ 0.17
NUP50-219ENST00000497960 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.1■□□□□ 0.17
NUP50-219ENST00000497960 O00370 1275 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 SETSIPP0DME0 302 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 EIF2DP41214 584 aaKnown RBP16.1■□□□□ 0.17
NUP50-219ENST00000497960 TKTL1P51854 596 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 KRT31Q15323 416 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 GAB4Q2WGN9 574 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 RAB41Q5JT25 222 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 PKN3Q6P5Z2 889 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 LCLAT1Q6UWP7 414 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 HTR3DQ70Z44 454 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 RSRC2Q7L4I2 434 aaKnown RBP16.1■□□□□ 0.17
NUP50-219ENST00000497960 ZNF276Q8N554 614 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 RPLP0P6Q8NHW5 317 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 UBA3Q8TBC4 463 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 RUBCNQ92622 972 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 KAT5Q92993 513 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 SECISBP2LQ93073 1101 aaKnown RBP16.1■□□□□ 0.17
NUP50-219ENST00000497960 ACDQ96AP0 544 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 PNKPQ96T60 521 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 C2orf42Q9NWW7 574 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 NUDT5Q9UKK9 219 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 SMG5Q9UPR3 1016 aaKnown RBP16.1■□□□□ 0.17
NUP50-219ENST00000497960 MYO16Q9Y6X6 1858 aa16.1■□□□□ 0.17
NUP50-219ENST00000497960 MYOFQ9NZM1 2061 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 MDM4O15151 490 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 ZBED1O96006 694 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 APODP05090 189 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 ZNF18P17022 549 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 CNR2P34972 360 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 YWHAGP61981 247 aaKnown RBP eCLIP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms