RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, human

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ELL3-208	ENST00000497700	ANKRD20A12P	Q8NF67	263 aa		19.01	■□□□□ 0.63
ELL3-208	ENST00000497700	GOLGA5	Q8TBA6	731 aa		19.01	■□□□□ 0.63
ELL3-208	ENST00000497700	ZNF516	Q92618	1163 aa		19.01	■□□□□ 0.63
ELL3-208	ENST00000497700	CGRRF1	Q99675	332 aa		19.01	■□□□□ 0.63
ELL3-208	ENST00000497700	B3GNT5	Q9BYG0	378 aa		19.01	■□□□□ 0.63
ELL3-208	ENST00000497700	ADAMTS9	Q9P2N4	1935 aa		19.01	■□□□□ 0.63
ELL3-208	ENST00000497700	CEP192	Q8TEP8	1941 aa		19	■□□□□ 0.63
ELL3-208	ENST00000497700	ASCC3	Q8N3C0	2202 aa	Known RBP	19	■□□□□ 0.63
ELL3-208	ENST00000497700	SGK1	O00141	431 aa		19	■□□□□ 0.63
ELL3-208	ENST00000497700	KLF8	O95600	359 aa	Predicted RBP	19	■□□□□ 0.63
ELL3-208	ENST00000497700	TOP3B	O95985	862 aa	Known RBP	19	■□□□□ 0.63
ELL3-208	ENST00000497700	MBL2	P11226	248 aa	Predicted RBP	19	■□□□□ 0.63
ELL3-208	ENST00000497700	PTPN1	P18031	435 aa	Known RBP	19	■□□□□ 0.63
ELL3-208	ENST00000497700	SPINK2	P20155	84 aa		19	■□□□□ 0.63
ELL3-208	ENST00000497700	RPL13	P26373	211 aa	Known RBP	19	■□□□□ 0.63
ELL3-208	ENST00000497700	PDE6C	P51160	858 aa		19	■□□□□ 0.63
ELL3-208	ENST00000497700	MYL6	P60660	151 aa		19	■□□□□ 0.63
ELL3-208	ENST00000497700	SNRPF	P62306	86 aa	Known RBP	19	■□□□□ 0.63
ELL3-208	ENST00000497700	NOP14	P78316	857 aa	Known RBP	19	■□□□□ 0.63
ELL3-208	ENST00000497700	SHC2	P98077	582 aa		19	■□□□□ 0.63
ELL3-208	ENST00000497700	WDR72	Q3MJ13	1102 aa		19	■□□□□ 0.63
ELL3-208	ENST00000497700	RHBDF2	Q6PJF5	856 aa		19	■□□□□ 0.63
ELL3-208	ENST00000497700	CYP2U1	Q7Z449	544 aa		19	■□□□□ 0.63
ELL3-208	ENST00000497700	ADGRG2	Q8IZP9	1017 aa		19	■□□□□ 0.63
ELL3-208	ENST00000497700	CNOT6L	Q96LI5	555 aa	Known RBP	19	■□□□□ 0.63
ELL3-208	ENST00000497700	C8orf48	Q96LL4	319 aa		19	■□□□□ 0.63
ELL3-208	ENST00000497700	NAP1L5	Q96NT1	182 aa	Predicted RBP	19	■□□□□ 0.63
ELL3-208	ENST00000497700	CGN	Q9P2M7	1197 aa	Known RBP	19	■□□□□ 0.63
ELL3-208	ENST00000497700	NXF1	Q9UBU9	619 aa	Known RBP	19	■□□□□ 0.63
ELL3-208	ENST00000497700	PI4KA	P42356	2102 aa		19	■□□□□ 0.63
ELL3-208	ENST00000497700		A0A1B0GTH6	734 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700	CETN3	O15182	167 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700	GNA14	O95837	355 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700	NR3C1	P04150	777 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700	CASP4	P49662	377 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700	TNNC1	P63316	161 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700	IRX4	P78413	519 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700	CYP24A1	Q07973	514 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700	ADAM9	Q13443	819 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700	IL17RC	Q8NAC3	791 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700	PIGK	Q92643	395 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700	WBP2	Q969T9	261 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700	EEF2KMT	Q96G04	330 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700	FNBP1	Q96RU3	617 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700	KCNK16	Q96T55	309 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700	SMYD3	Q9H7B4	428 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700	PLXND1	Q9Y4D7	1925 aa		18.99	■□□□□ 0.63
ELL3-208	ENST00000497700		A8MXQ7	604 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	CDX4	O14627	284 aa	Predicted RBP	18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	TACC1	O75410	805 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	KAT7	O95251	611 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	NR2F2	P24468	414 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	COPB1	P53618	953 aa	Known RBP	18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	CDH8	P55286	799 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	ZNF252P-AS1	Q0IIN9	211 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	FOXC1	Q12948	553 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	NR1I3	Q14994	352 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	PSMD6	Q15008	389 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	FILIP1L	Q4L180	1135 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	LY6G5C	Q5SRR4	150 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	SH3PXD2A	Q5TCZ1	1133 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	TDRD10	Q5VZ19	366 aa	Known RBP	18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	CREBRF	Q8IUR6	639 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	SLC9A9	Q8IVB4	645 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	C12orf56	Q8IXR9	622 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	NAT16	Q8N8M0	369 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	B3GALNT2	Q8NCR0	500 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	SCAMP5	Q8TAC9	235 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	PLEKHO2	Q8TD55	490 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	TMEM174	Q8WUU8	243 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	ERLEC1	Q96DZ1	483 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	ZFR	Q96KR1	1074 aa	Known RBP	18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	PNKP	Q96T60	521 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	DMAC2	Q9NW81	257 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	TAB2	Q9NYJ8	693 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	CEP295	Q9C0D2	2601 aa		18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	ATXN2	Q99700	1313 aa	Known RBP	18.98	■□□□□ 0.63
ELL3-208	ENST00000497700	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	C1QTNF9B	B2RNN3	333 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	KHNYN	O15037	678 aa	Known RBP	18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	COCH	O43405	550 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	ADAM23	O75077	832 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	TPM3	P06753	285 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	C1QTNF9	P0C862	333 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	ADH5	P11766	374 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	PFKL	P17858	780 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	MARS	P56192	900 aa	Known RBP	18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	MRPS21	P82921	87 aa	Known RBP	18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	UAP1L1	Q3KQV9	507 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	SCARA5	Q6ZMJ2	495 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	TMEFF1	Q8IYR6	380 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	OLIG1	Q8TAK6	271 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	HMGB4	Q8WW32	186 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	FBXO32	Q969P5	355 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	CEP295NL	Q96MC4	621 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	SLITRK1	Q96PX8	696 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	ELOVL4	Q9GZR5	314 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	XYLT2	Q9H1B5	865 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	KIAA1586	Q9HCI6	787 aa		18.97	■□□□□ 0.63
ELL3-208	ENST00000497700	RTN4	Q9NQC3	1192 aa	Known RBP	18.97	■□□□□ 0.63

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms