RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 CENPCQ03188 943 aa21.03■□□□□ 0.96
CTSD-206ENST00000497544 PTPN20Q4JDL3 420 aa21.03■□□□□ 0.96
CTSD-206ENST00000497544 PRSS36Q5K4E3 855 aa21.03■□□□□ 0.96
CTSD-206ENST00000497544 OR6B2Q6IFH4 312 aa21.03■□□□□ 0.96
CTSD-206ENST00000497544 ARHGAP18Q8N392 663 aa21.03■□□□□ 0.96
CTSD-206ENST00000497544 SUSD6Q92537 303 aa21.03■□□□□ 0.96
CTSD-206ENST00000497544 NDRG1Q92597 394 aaKnown RBP21.03■□□□□ 0.96
CTSD-206ENST00000497544 TCEAL4Q96EI5 215 aa21.03■□□□□ 0.96
CTSD-206ENST00000497544 NHEJ1Q9H9Q4 299 aaPredicted RBP21.03■□□□□ 0.96
CTSD-206ENST00000497544 GMIPQ9P107 970 aa21.03■□□□□ 0.96
CTSD-206ENST00000497544 SART1O43290 800 aaKnown RBP21.02■□□□□ 0.96
CTSD-206ENST00000497544 RTN2O75298 545 aa21.02■□□□□ 0.96
CTSD-206ENST00000497544 ERBB2P04626 1255 aa21.02■□□□□ 0.96
CTSD-206ENST00000497544 CCR2P41597 374 aa21.02■□□□□ 0.96
CTSD-206ENST00000497544 GABRB2P47870 512 aa21.02■□□□□ 0.96
CTSD-206ENST00000497544 DAOAP59103 153 aa21.02■□□□□ 0.96
CTSD-206ENST00000497544 SLC5A9Q2M3M2 681 aa21.02■□□□□ 0.96
CTSD-206ENST00000497544 TMEM150AQ86TG1 271 aa21.02■□□□□ 0.96
CTSD-206ENST00000497544 PHF13Q86YI8 300 aaPredicted RBP21.02■□□□□ 0.96
CTSD-206ENST00000497544 ITFG1Q8TB96 612 aa21.02■□□□□ 0.96
CTSD-206ENST00000497544 SHKBP1Q8TBC3 707 aa21.02■□□□□ 0.96
CTSD-206ENST00000497544 IRGQQ8WZA9 623 aa21.02■□□□□ 0.96
CTSD-206ENST00000497544 GOLGA1Q92805 767 aa21.02■□□□□ 0.96
CTSD-206ENST00000497544 C11orf70Q9BRQ4 267 aa21.02■□□□□ 0.96
CTSD-206ENST00000497544 POMKQ9H5K3 350 aa21.02■□□□□ 0.96
CTSD-206ENST00000497544 ADAM22Q9P0K1 906 aa21.02■□□□□ 0.96
CTSD-206ENST00000497544 TJP2Q9UDY2 1190 aa21.02■□□□□ 0.96
CTSD-206ENST00000497544 CHD6Q8TD26 2715 aa21.02■□□□□ 0.96
CTSD-206ENST00000497544 DENND4CQ5VZ89 1909 aa21.02■□□□□ 0.95
CTSD-206ENST00000497544 EP300Q09472 2414 aaPredicted RBP21.02■□□□□ 0.95
CTSD-206ENST00000497544 MYO16Q9Y6X6 1858 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 A0A087X0T9 212 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 ZNF840PA6NDX5 716 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 PAPSS1O43252 624 aaPredicted RBP21.01■□□□□ 0.95
CTSD-206ENST00000497544 FTLP02792 175 aaPredicted RBP21.01■□□□□ 0.95
CTSD-206ENST00000497544 FAM228BP0C875 321 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 RALAP11233 206 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 MMP8P22894 467 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 PSEN1P49768 467 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 CYP4F8P98187 520 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 TEAD2Q15562 447 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 ALKBH5Q6P6C2 394 aaKnown RBP21.01■□□□□ 0.95
CTSD-206ENST00000497544 MMS22LQ6ZRQ5 1243 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 GET4Q7L5D6 327 aaPredicted RBP21.01■□□□□ 0.95
CTSD-206ENST00000497544 ZDHHC17Q8IUH5 632 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 TMTC1Q8IUR5 882 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 TMEM105Q8N8V8 129 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 OLIG1Q8TAK6 271 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 ING5Q8WYH8 240 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 TAS2R14Q9NYV8 317 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.01■□□□□ 0.95
CTSD-206ENST00000497544 NAGPAQ9UK23 515 aa21.01■□□□□ 0.95
CTSD-206ENST00000497544 ANAPC1Q9H1A4 1944 aa21■□□□□ 0.95
CTSD-206ENST00000497544 A0A1W2PQH9 124 aa21■□□□□ 0.95
CTSD-206ENST00000497544 MOSPD3O75425 235 aa21■□□□□ 0.95
CTSD-206ENST00000497544 CALB1P05937 261 aa21■□□□□ 0.95
CTSD-206ENST00000497544 GBP2P32456 591 aaPredicted RBP21■□□□□ 0.95
CTSD-206ENST00000497544 YWHAGP61981 247 aaKnown RBP eCLIP21■□□□□ 0.95
CTSD-206ENST00000497544 ZNF268Q14587 947 aaPredicted RBP21■□□□□ 0.95
CTSD-206ENST00000497544 SLC18A3Q16572 532 aa21■□□□□ 0.95
CTSD-206ENST00000497544 C2CD6Q53TS8 623 aa21■□□□□ 0.95
CTSD-206ENST00000497544 CCDC122Q5T0U0 273 aa21■□□□□ 0.95
CTSD-206ENST00000497544 GPR158Q5T848 1215 aa21■□□□□ 0.95
CTSD-206ENST00000497544 BTBD8Q5XKL5 378 aa21■□□□□ 0.95
CTSD-206ENST00000497544 CLEC4CQ8WTT0 213 aa21■□□□□ 0.95
CTSD-206ENST00000497544 FAM149B1Q96BN6 582 aa21■□□□□ 0.95
CTSD-206ENST00000497544 BAG1Q99933 345 aaPredicted RBP21■□□□□ 0.95
CTSD-206ENST00000497544 SLITRK6Q9H5Y7 841 aa21■□□□□ 0.95
CTSD-206ENST00000497544 TASP1Q9H6P5 420 aa21■□□□□ 0.95
CTSD-206ENST00000497544 WDR35Q9P2L0 1181 aa21■□□□□ 0.95
CTSD-206ENST00000497544 STRIP2Q9ULQ0 834 aa21■□□□□ 0.95
CTSD-206ENST00000497544 NCANO14594 1321 aa21■□□□□ 0.95
CTSD-206ENST00000497544 YJEFN3A6XGL0 299 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 E7ENQ6 273 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 TADA3O75528 432 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 ZDHHC11BP0C7U3 371 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 CEBPBP17676 345 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 DDX6P26196 483 aaKnown RBP eCLIP20.99■□□□□ 0.95
CTSD-206ENST00000497544 CYLC1P35663 651 aaPredicted RBP20.99■□□□□ 0.95
CTSD-206ENST00000497544 SLC6A3Q01959 620 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 GFPT1Q06210 699 aaPredicted RBP20.99■□□□□ 0.95
CTSD-206ENST00000497544 C1QBPQ07021 282 aaKnown RBP20.99■□□□□ 0.95
CTSD-206ENST00000497544 ASTE1Q2TB18 679 aaPredicted RBP20.99■□□□□ 0.95
CTSD-206ENST00000497544 EFHC1Q5JVL4 640 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 HECTD3Q5T447 861 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 SNX30Q5VWJ9 437 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 BSPRYQ5W0U4 402 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 TXNDC8Q6A555 127 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 TOGARAM2Q6ZUX3 1019 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 FAM183BPQ6ZVS7 135 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 SCD5Q86SK9 330 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 XYLT1Q86Y38 959 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 CCDC170Q8IYT3 715 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 MCOLN2Q8IZK6 566 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 MAB21L3Q8N8X9 362 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 FGF13Q92913 245 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 MCRS1Q96EZ8 462 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 VCPIP1Q96JH7 1222 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 ISCUQ9H1K1 167 aa20.99■□□□□ 0.95
CTSD-206ENST00000497544 NMUR1Q9HB89 426 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms