RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 BEX3Q00994 111 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 PABPC1LQ4VXU2 614 aaKnown RBP12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 TFDP3Q5H9I0 405 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 OLFML1Q6UWY5 402 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 RNF168Q8IYW5 571 aaPredicted RBP12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 TMEM130Q8N3G9 435 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 SMG8Q8ND04 991 aaKnown RBP12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 SNF8Q96H20 258 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 HEXIM2Q96MH2 286 aaKnown RBP12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 TSC22D3Q99576 134 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 ZWILCHQ9H900 591 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 R3HDM2Q9Y2K5 976 aaKnown RBP12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 USP15Q9Y4E8 981 aaPredicted RBP12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 TRPV2Q9Y5S1 764 aa12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 TRIP12Q14669 1992 aaPredicted RBP12.06□□□□□ -0.48
SNRNP200-208ENST00000497539 SMIM28A0A1B0GU29 152 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 LRCH4O75427 683 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 RARGP13631 454 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 PSMA2P25787 234 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 KLRC2P26717 231 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 ZNF143P52747 638 aaPredicted RBP12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 DPH6Q7L8W6 267 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 FITM2Q8N6M3 262 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 GBP7Q8N8V2 638 aaPredicted RBP12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 JOSD2Q8TAC2 188 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 C1orf54Q8WWF1 131 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 MRPL45Q9BRJ2 306 aaKnown RBP12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 CXCL16Q9H2A7 254 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 TSPAN16Q9UKR8 245 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 PIN4Q9Y237 131 aaKnown RBP12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 COL4A4P53420 1690 aaPredicted RBP12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 LIASO43766 372 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 ENDOD1O94919 500 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 TCF4P15884 667 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 CHKAP35790 457 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 VPS41P49754 854 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 MGAT3Q09327 533 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 HADHQ16836 314 aaKnown RBP12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 TRMT10CQ7L0Y3 403 aaKnown RBP12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 TOP6BLQ8N6T0 577 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 CMASQ8NFW8 434 aaPredicted RBP12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 FAM167BQ9BTA0 163 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 NSRP1Q9H0G5 558 aaKnown RBP12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 METTL5Q9NRN9 209 aaKnown RBP12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 USTQ9Y2C2 406 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 IPPQ9Y573 584 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 NME7Q9Y5B8 376 aa12.05□□□□□ -0.48
SNRNP200-208ENST00000497539 MYADML2A6NDP7 307 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 ZNF487B1APH4 448 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 PPEF2O14830 753 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 PENKP01210 267 aaPredicted RBP12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 DESP17661 470 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 WARSP23381 471 aaKnown RBP12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 HOXD10P28358 340 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 PHEXP78562 749 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 SOWAHAQ2M3V2 549 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 GOLGA7BQ2TAP0 167 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 SV2CQ496J9 727 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 FBXO47Q5MNV8 452 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 MFSD7Q6UXD7 560 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 CEP128Q6ZU80 1094 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 SERINC5Q86VE9 423 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 REM2Q8IYK8 340 aaPredicted RBP12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 SLC35F5Q8WV83 523 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 KBTBD7Q8WVZ9 684 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 TRIB2Q92519 343 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 C18orf25Q96B23 403 aaPredicted RBP12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 CNPY3Q9BT09 278 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 CFHR5Q9BXR6 569 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 CDC42EP4Q9H3Q1 356 aaKnown RBP12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 TJP2Q9UDY2 1190 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 CFAP73A6NFT4 308 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 DCAF8L1A6NGE4 600 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 C2CD4BA6NLJ0 364 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 SEPT4O43236 478 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 ADAMTS4O75173 837 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 ITGAVP06756 1048 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 CA8P35219 290 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 ZNF200P98182 395 aaPredicted RBP12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 OASLQ15646 514 aaKnown RBP12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 KYNUQ16719 465 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 ZFYVE27Q5T4F4 411 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 DAB2IPQ5VWQ8 1189 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 VSTM1Q6UX27 236 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 BBS12Q6ZW61 710 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 CYP4X1Q8N118 509 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 CCDC89Q8N998 374 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 PPP1R10Q96QC0 940 aaKnown RBP12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 SENP6Q9GZR1 1112 aaPredicted RBP12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 ASNSD1Q9NWL6 643 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 GPD1P21695 349 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 TAF6P49848 677 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 ARSEP51690 589 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 RNASELQ05823 741 aaKnown RBP12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 CALCOCO2Q13137 446 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 DYNC1I2Q13409 638 aaKnown RBP12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 RIPK1Q13546 671 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 FAM47EQ6ZV65 393 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 TAOK1Q7L7X3 1001 aa12.04□□□□□ -0.48
SNRNP200-208ENST00000497539 RSPH3Q86UC2 560 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms