RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 LIMCH1Q9UPQ0 1083 aa5.41□□□□□ -1.54
CSMD3-208ENST00000497026 EVPLQ92817 2033 aa5.41□□□□□ -1.54
CSMD3-208ENST00000497026 ARID2Q68CP9 1835 aa5.41□□□□□ -1.54
CSMD3-208ENST00000497026 IGSF9BQ9UPX0 1349 aa5.41□□□□□ -1.54
CSMD3-208ENST00000497026 CYP3A7-CYP3A51PA0A087WV96 503 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 C17orf102A2RUQ5 167 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 MBLAC1A4D2B0 266 aaPredicted RBP5.4□□□□□ -1.54
CSMD3-208ENST00000497026 GRXCR1A8MXD5 290 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 PATE3B3GLJ2 98 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 MSH4O15457 936 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 ATP8B1O43520 1251 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 NBNO60934 754 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 PSMD10O75832 226 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 MPIG6BO95866 241 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 FSHBP01225 129 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 MMP1P03956 469 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 CYP3A7P24462 503 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 CD83Q01151 205 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 BFSP2Q13515 415 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 NONOQ15233 471 aaKnown RBP eCLIP5.4□□□□□ -1.54
CSMD3-208ENST00000497026 ZRSR1Q15695 479 aaKnown RBP5.4□□□□□ -1.54
CSMD3-208ENST00000497026 Q4G0T1 1027 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 ZNF618Q5T7W0 954 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 GALNT17Q6IS24 598 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 PSRC1Q6PGN9 363 aaPredicted RBP5.4□□□□□ -1.54
CSMD3-208ENST00000497026 MOXD1Q6UVY6 613 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 ABHD15Q6UXT9 468 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 LEKR1Q6ZMV7 388 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 Q7L0L9 218 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 LRRC8DQ7L1W4 858 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 OTOP2Q7RTS6 562 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 DEFB128Q7Z7B8 93 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 NOSTRINQ8IVI9 506 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 IGSF22Q8N9C0 903 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 HIPK4Q8NE63 616 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 GOLGA5Q8TBA6 731 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 ETNPPLQ8TBG4 499 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 PPM1EQ8WY54 764 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 HERVK_113Q902F9 699 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 SLC5A5Q92911 643 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 ATP6V0A1Q93050 837 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 ZBTB10Q96DT7 871 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 RNPC3Q96LT9 517 aaKnown RBP5.4□□□□□ -1.54
CSMD3-208ENST00000497026 ZNF577Q9BSK1 485 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 FAM107BQ9H098 131 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 DONSONQ9NYP3 566 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 ERAP1Q9NZ08 941 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 TSC22D4Q9Y3Q8 395 aa5.4□□□□□ -1.54
CSMD3-208ENST00000497026 NRCAMQ92823 1304 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 TCRBV16S1A1N1A0A5B0 115 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 BTBD18B2RXH4 712 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 C1QTNF3-AMACRE9PGA6 284 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 MYO1CO00159 1063 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 EFCAB14O75071 495 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 KRT37O76014 449 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 SLU7O95391 586 aaKnown RBP5.4□□□□□ -1.55
CSMD3-208ENST00000497026 FGBP02675 491 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 CXCL10P02778 98 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 TUBB4AP04350 444 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 PFKMP08237 780 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 TPM1P09493 284 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 XBP1P17861 261 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 RFC2P35250 354 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 STAT5BP51692 787 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 SMAD3P84022 425 aaKnown RBP5.4□□□□□ -1.55
CSMD3-208ENST00000497026 MGAT3Q09327 533 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 PPFIA1Q13136 1202 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 DHX8Q14562 1220 aaKnown RBP5.4□□□□□ -1.55
CSMD3-208ENST00000497026 PLCB4Q15147 1175 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 TBR1Q16650 682 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 UGCGQ16739 394 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 TPD52L1Q16890 204 aaPredicted RBP5.4□□□□□ -1.55
CSMD3-208ENST00000497026 LETM2Q2VYF4 491 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 ZNF568Q3ZCX4 644 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 SPDYAQ5MJ70 313 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 KRT40Q6A162 431 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 KRBA2Q6ZNG9 492 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 PIK3AP1Q6ZUJ8 805 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 OVCH1Q7RTY7 1134 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 PLPPR4Q7Z2D5 763 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 FILIP1Q7Z7B0 1213 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 NEK8Q86SG6 692 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 SRLQ86TD4 932 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 RPAINQ86UA6 219 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 DIS3L2Q8IYB7 885 aaKnown RBP5.4□□□□□ -1.55
CSMD3-208ENST00000497026 C10orf67Q8IYJ2 551 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 C17orf53Q8N3J3 647 aaPredicted RBP5.4□□□□□ -1.55
CSMD3-208ENST00000497026 ZSWIM2Q8NEG5 633 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 THAP3Q8WTV1 239 aaPredicted RBP5.4□□□□□ -1.55
CSMD3-208ENST00000497026 TRAPPC12Q8WVT3 735 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 ASB15Q8WXK1 588 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 WASF1Q92558 559 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 HAS1Q92839 578 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 GLG1Q92896 1179 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 C16orf45Q96MC5 204 aaPredicted RBP5.4□□□□□ -1.55
CSMD3-208ENST00000497026 RIT2Q99578 217 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 DPYSL5Q9BPU6 564 aa5.4□□□□□ -1.55
CSMD3-208ENST00000497026 TTYH1Q9H313 450 aaPredicted RBP5.4□□□□□ -1.55
CSMD3-208ENST00000497026 C12orf65Q9H3J6 166 aaKnown RBP5.4□□□□□ -1.55
CSMD3-208ENST00000497026 UNC45AQ9H3U1 944 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms