RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 BEST1O76090 585 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 ASS1P00966 412 aaKnown RBP15.2■□□□□ 0.02
CXCL12-208ENST00000496375 ZDHHC11BP0C7U3 371 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 KRT13P13646 458 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 TIE1P35590 1138 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 PIK3CAP42336 1068 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 TUBP50607 506 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 CREB5Q02930 508 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 KDSRQ06136 332 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 CRY1Q16526 586 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 USP39Q53GS9 565 aaKnown RBP15.2■□□□□ 0.02
CXCL12-208ENST00000496375 LY6G5CQ5SRR4 150 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 STPG1Q5TH74 334 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 TCEAL6Q6IPX3 200 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 SPOPLQ6IQ16 392 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 TTC30AQ86WT1 665 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 CRYBG2Q8N1P7 616 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 ALLCQ8N6M5 410 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 MDGA1Q8NFP4 955 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 TAF4BQ92750 862 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 TCEAL3Q969E4 200 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 OTUB2Q96DC9 234 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 CNOT6LQ96LI5 555 aaKnown RBP15.2■□□□□ 0.02
CXCL12-208ENST00000496375 METTL14Q9HCE5 456 aaKnown RBP15.2■□□□□ 0.02
CXCL12-208ENST00000496375 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.2■□□□□ 0.02
CXCL12-208ENST00000496375 ARHGEF4Q9NR80 690 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 FAM49BQ9NUQ9 324 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 COMMD8Q9NX08 183 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 DACH1Q9UI36 760 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 THADAQ6YHU6 1953 aa15.2■□□□□ 0.02
CXCL12-208ENST00000496375 ACACBO00763 2458 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 BCLAF3A2AJT9 711 aaKnown RBP15.19■□□□□ 0.02
CXCL12-208ENST00000496375 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.19■□□□□ 0.02
CXCL12-208ENST00000496375 PMM2O15305 246 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 KLF8O95600 359 aaPredicted RBP15.19■□□□□ 0.02
CXCL12-208ENST00000496375 GNA14O95837 355 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 HLA-DRAP01903 254 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 IRF1P10914 325 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 CHRM1P11229 460 aaPredicted RBP15.19■□□□□ 0.02
CXCL12-208ENST00000496375 HNRNPLP14866 589 aaKnown RBP eCLIP15.19■□□□□ 0.02
CXCL12-208ENST00000496375 GRIA2P42262 883 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 ASPAP45381 313 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 PGFP49763 221 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 MAP3K7CLP57077 242 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 GAD2Q05329 585 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 PPP3CAQ08209 521 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 PMS2CLQ68D20 193 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 TMEM92Q6UXU6 159 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 C11orf74Q86VG3 221 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 UNC93AQ86WB7 457 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 C12orf29Q8N999 325 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 IL17RCQ8NAC3 791 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 TXNDC5Q8NBS9 432 aaKnown RBP15.19■□□□□ 0.02
CXCL12-208ENST00000496375 WBP2Q969T9 261 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 NACA2Q9H009 215 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 TMEM8AQ9HCN3 771 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 CSNK1G1Q9HCP0 422 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 ARMCX3Q9UH62 379 aaPredicted RBP15.19■□□□□ 0.02
CXCL12-208ENST00000496375 NUP205Q92621 2012 aa15.19■□□□□ 0.02
CXCL12-208ENST00000496375 MYO18AQ92614 2054 aaKnown RBP15.18■□□□□ 0.02
CXCL12-208ENST00000496375 A0A0A0MRY4 1105 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 SGK1O00141 431 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 TM4SF5O14894 197 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 STX10O60499 249 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 TLR5O60602 858 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 ALDH1A2O94788 518 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 CAVIN2O95810 425 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 FAM200BP0CF97 657 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 TRIM49P0CI25 452 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 TRIM49CP0CI26 452 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 BCKDHBP21953 392 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 ADORA2BP29275 332 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 KIR2DL1P43626 348 aaPredicted RBP15.18■□□□□ 0.02
CXCL12-208ENST00000496375 HSF5Q4G112 596 aaPredicted RBP15.18■□□□□ 0.02
CXCL12-208ENST00000496375 EMC10Q5UCC4 262 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 BTBD8Q5XKL5 378 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 BBS7Q8IWZ6 715 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 ETFBKMTQ8IXQ9 262 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 PHTF2Q8N3S3 785 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 NAT16Q8N8M0 369 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 SLC35C1Q96A29 364 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 EEF2KMTQ96G04 330 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 FAXDC2Q96IV6 333 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 TWNKQ96RR1 684 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 FBXO44Q9H4M3 255 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 ZDHHC4Q9NPG8 344 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 TLR8Q9NR97 1041 aaKnown RBP15.18■□□□□ 0.02
CXCL12-208ENST00000496375 COQ4Q9Y3A0 265 aa15.18■□□□□ 0.02
CXCL12-208ENST00000496375 EPG5Q9HCE0 2579 aa15.17■□□□□ 0.02
CXCL12-208ENST00000496375 HOXC11O43248 304 aaPredicted RBP15.17■□□□□ 0.02
CXCL12-208ENST00000496375 FGFR1OPO95684 399 aaKnown RBP15.17■□□□□ 0.02
CXCL12-208ENST00000496375 TBX18O95935 607 aa15.17■□□□□ 0.02
CXCL12-208ENST00000496375 TRIM21P19474 475 aaKnown RBP15.17■□□□□ 0.02
CXCL12-208ENST00000496375 TNFRSF4P43489 277 aa15.17■□□□□ 0.02
CXCL12-208ENST00000496375 STX17P56962 302 aa15.17■□□□□ 0.02
CXCL12-208ENST00000496375 ANO4Q32M45 955 aa15.17■□□□□ 0.02
CXCL12-208ENST00000496375 EOGTQ5NDL2 527 aa15.17■□□□□ 0.02
CXCL12-208ENST00000496375 RNF43Q68DV7 783 aa15.17■□□□□ 0.02
CXCL12-208ENST00000496375 KRT39Q6A163 491 aa15.17■□□□□ 0.02
CXCL12-208ENST00000496375 GPRIN1Q7Z2K8 1008 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms