RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 P3H2Q8IVL5 708 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 C12orf76Q8N812 135 aaPredicted RBP6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 PNPLA1Q8N8W4 532 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 CTHRC1Q96CG8 243 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 LRRC46Q96FV0 321 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 C5orf34Q96MH7 638 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 TBCBQ99426 244 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 FAM118BQ9BPY3 351 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 SLC27A6Q9Y2P4 619 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 PCSK5Q92824 1860 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 ZNF804BA4D1E1 1349 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 ANO9A1A5B4 782 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 CGB1A6NKQ9 187 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 APOL1O14791 398 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 DSCR3O14972 297 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 PMM2O15305 246 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 MYL1P05976 194 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 NHLRC4P0CG21 123 aaPredicted RBP6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 CYP2A6P11509 494 aaPredicted RBP6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 FGFR2P21802 821 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 MPGP29372 298 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 NTSR1P30989 418 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 ATICP31939 592 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 GNALP38405 381 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 CASP5P51878 434 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 COPAP53621 1224 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 CFHR3Q02985 330 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 CC2D1BQ5T0F9 858 aaKnown RBP6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 SLC18B1Q6NT16 456 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 ZNF813Q6ZN06 617 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 DCDC5Q6ZRR9 648 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 USP49Q70CQ1 688 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 YTHDF3Q7Z739 585 aaKnown RBP6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 LIX1LQ8IVB5 337 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 GALNT16Q8N428 558 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 C8orf58Q8NAV2 365 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 SMG7Q92540 1137 aaKnown RBP6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 USP29Q9HBJ7 922 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 PI4KBQ9UBF8 816 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 LPAR3Q9UBY5 353 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 CEP83Q9Y592 693 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 WDR17Q8IZU2 1322 aa6.22□□□□□ -1.41
NCKAP1-208ENST00000495619 COL15A1P39059 1388 aa6.21□□□□□ -1.41
NCKAP1-208ENST00000495619 TCRBV5S1A1TA0A578 114 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 DNAJC9-AS1A6NH13 148 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 PRC1O43663 620 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 YY1P25490 414 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 PRIM2P49643 509 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 CCDC15Q0P6D6 951 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 GPS1Q13098 491 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 PICALMQ13492 652 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 ZNF268Q14587 947 aaPredicted RBP6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 KCNB1Q14721 858 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 LARS2Q15031 903 aaKnown RBP6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 MORN5Q5VZ52 161 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 MRNIPQ6NTE8 343 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 ZNF66Q6ZN08 573 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 SKAP1Q86WV1 359 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 CNGA4Q8IV77 575 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 TXLNBQ8N3L3 684 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 MAFAQ8NHW3 353 aaPredicted RBP6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 WDYHV1Q96HA8 205 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 SNX27Q96L92 541 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 GAR1Q9NY12 217 aaKnown RBP6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 MYO1AQ9UBC5 1043 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 VPS51Q9UID3 782 aa6.21□□□□□ -1.42
NCKAP1-208ENST00000495619 WDR91A4D1P6 747 aa6.2□□□□□ -1.42
NCKAP1-208ENST00000495619 AGPSO00116 658 aa6.2□□□□□ -1.42
NCKAP1-208ENST00000495619 APAF1O14727 1248 aa6.2□□□□□ -1.42
NCKAP1-208ENST00000495619 ADAMTS3O15072 1205 aa6.2□□□□□ -1.42
NCKAP1-208ENST00000495619 WDR47O94967 919 aa6.2□□□□□ -1.42
NCKAP1-208ENST00000495619 APEHP13798 732 aaKnown RBP6.2□□□□□ -1.42
NCKAP1-208ENST00000495619 TSHRP16473 764 aa6.2□□□□□ -1.42
NCKAP1-208ENST00000495619 ARL13BQ3SXY8 428 aa6.2□□□□□ -1.42
NCKAP1-208ENST00000495619 CEP78Q5JTW2 689 aa6.2□□□□□ -1.42
NCKAP1-208ENST00000495619 KLHDC7AQ5VTJ3 777 aa6.2□□□□□ -1.42
NCKAP1-208ENST00000495619 METTL25Q8N6Q8 603 aa6.2□□□□□ -1.42
NCKAP1-208ENST00000495619 CUL5Q93034 780 aa6.2□□□□□ -1.42
NCKAP1-208ENST00000495619 ASIC5Q9NY37 505 aa6.2□□□□□ -1.42
NCKAP1-208ENST00000495619 ARHGEF17Q96PE2 2063 aaPredicted RBP6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 H3BNC9 293 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 SLC5A1P13866 664 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 MMP13P45452 471 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 PLCD1P51178 756 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 PFKFB3Q16875 520 aaPredicted RBP6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 ZNF626Q68DY1 528 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 ANO7Q6IWH7 933 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 CRTC1Q6UUV9 634 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 RANBP10Q6VN20 620 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 TTC30AQ86WT1 665 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 LINC01465Q8N7H1 131 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 PRSS3P2Q8NHM4 247 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 DENND1AQ8TEH3 1009 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 BRI3BPQ8WY22 251 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 PMM1Q92871 262 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 HIC2Q96JB3 615 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 TNIP3Q96KP6 325 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 SELENOOQ9BVL4 669 aa6.19□□□□□ -1.42
NCKAP1-208ENST00000495619 CYP2D7A0A087X1C5 515 aa6.18□□□□□ -1.42
NCKAP1-208ENST00000495619 A0A1W2PPC4 97 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms