RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 CROCCP2Q86T23 111 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 OSTM1Q86WC4 334 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 PSTKQ8IV42 348 aaKnown RBP10.71□□□□□ -0.69
HDAC3-214ENST00000495485 SCUBE3Q8IX30 993 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 SCML4Q8N228 414 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 TMEM130Q8N3G9 435 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 MREGQ8N565 214 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 KLHL23Q8NBE8 558 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 CMASQ8NFW8 434 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-214ENST00000495485 SPPL3Q8TCT6 385 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-214ENST00000495485 CASKIN2Q8WXE0 1202 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 CCDC114Q96M63 670 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 DDX23Q9BUQ8 820 aaKnown RBP10.71□□□□□ -0.69
HDAC3-214ENST00000495485 ZWILCHQ9H900 591 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 PNPLA8Q9NP80 782 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 CNGB3Q9NQW8 809 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 TLR9Q9NR96 1032 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.71□□□□□ -0.69
HDAC3-214ENST00000495485 ZNF446Q9NWS9 450 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 DPP7Q9UHL4 492 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 ADAM28Q9UKQ2 775 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 NFU1Q9UMS0 254 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 MTCL1Q9Y4B5 1905 aaKnown RBP10.71□□□□□ -0.69
HDAC3-214ENST00000495485 hCG_1818297A0A087WSY0 165 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 GOLGA6L10A6NI86 522 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 BHMG1C9JSJ3 638 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-214ENST00000495485 CAPN9O14815 690 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 SYN3O14994 580 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 MDM4O15151 490 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 PAPSS1O43252 624 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-214ENST00000495485 TADA2AO75478 443 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 DDHD2O94830 711 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 GJB6O95452 261 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 F9P00740 461 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 SOD2P04179 222 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 ITGB1P05556 798 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 SRGAP2BP0DMP2 458 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 FOSL2P15408 326 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 MIPP30301 263 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 NOS2P35228 1153 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 MATKP42679 507 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 OR1G1P47890 313 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 SLC11A1P49279 550 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 CARSP49589 748 aaKnown RBP10.7□□□□□ -0.7
HDAC3-214ENST00000495485 AIF1P55008 147 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 YWHAZP63104 245 aaKnown RBP10.7□□□□□ -0.7
HDAC3-214ENST00000495485 MRPS5P82675 430 aaKnown RBP10.7□□□□□ -0.7
HDAC3-214ENST00000495485 OGDHQ02218 1023 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 SLC25A11Q02978 314 aaKnown RBP10.7□□□□□ -0.7
HDAC3-214ENST00000495485 ZNF252P-AS1Q0IIN9 211 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 KLF1Q13351 362 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-214ENST00000495485 GRIN2CQ14957 1233 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 SLMAPQ14BN4 828 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 NFE2Q16621 373 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-214ENST00000495485 USP41Q3LFD5 358 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 INTS6LQ5JSJ4 861 aaKnown RBP10.7□□□□□ -0.7
HDAC3-214ENST00000495485 ERMARDQ5T6L9 678 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 KAZNQ674X7 775 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 DUPD1Q68J44 220 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 AADACL2Q6P093 401 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 SCYL2Q6P3W7 929 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 ELMSAN1Q6PJG2 1045 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 PCGF5Q86SE9 256 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 FAM35AQ86V20 835 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 PIGZQ86VD9 579 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 ZNF280BQ86YH2 543 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 RFX6Q8HWS3 928 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 SPATA2LQ8IUW3 424 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-214ENST00000495485 FUKQ8N0W3 1084 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 EMC1Q8N766 993 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 FAM172AQ8WUF8 416 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 IRGQQ8WZA9 623 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 FAM149B1Q96BN6 582 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 HAUS1Q96CS2 278 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 FMO2Q99518 471 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 CDX2Q99626 313 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-214ENST00000495485 FERMT1Q9BQL6 677 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 HEMGNQ9BXL5 484 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 FOXP3Q9BZS1 431 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 POPDC2Q9HBU9 364 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 WHRNQ9P202 907 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 ZNF148Q9UQR1 794 aa10.7□□□□□ -0.7
HDAC3-214ENST00000495485 A0A0C4DFX4 3053 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 GOLGA6BA6NDN3 693 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 H7C4K7 107 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 SMAPO00193 183 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 DAPK3O43293 454 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 DAB1O75553 588 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 CTSAP10619 480 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 ACAT1P24752 427 aaKnown RBP10.69□□□□□ -0.7
HDAC3-214ENST00000495485 ACTN2P35609 894 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 CDKN2BP42772 138 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 PTGIRP43119 386 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 TKTL1P51854 596 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 ZNF135P52742 658 aaPredicted RBP10.69□□□□□ -0.7
HDAC3-214ENST00000495485 MAP3K7CLP57077 242 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 PTK6Q13882 451 aa10.69□□□□□ -0.7
HDAC3-214ENST00000495485 BYSLQ13895 437 aaKnown RBP10.69□□□□□ -0.7
HDAC3-214ENST00000495485 SIX1Q15475 284 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms