RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 ZNF487B1APH4 448 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 PPEF2O14830 753 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 LRCH4O75427 683 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 NRIP1P48552 1158 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 NDUFV1P49821 464 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 SLC8A3P57103 927 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 LILRA4P59901 499 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 GLRA4Q5JXX5 417 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 PPP1R26Q5T8A7 1209 aaPredicted RBP17.01■□□□□ 0.31
CBX4-204ENST00000495122 FAM102AQ5T9C2 384 aaPredicted RBP17.01■□□□□ 0.31
CBX4-204ENST00000495122 ADHFE1Q8IWW8 467 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 ADGRF2Q8IZF7 708 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 ABI1Q8IZP0 508 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 KBTBD7Q8WVZ9 684 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 SNF8Q96H20 258 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 GDAP1L1Q96MZ0 367 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 ZIM3Q96PE6 472 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 LRFN3Q9BTN0 628 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 DPH5Q9H2P9 285 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 RNF39Q9H2S5 420 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 GRHL1Q9NZI5 618 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 CLEC1BQ9P126 229 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 LZTS1Q9Y250 596 aa17.01■□□□□ 0.31
CBX4-204ENST00000495122 GOLGA6L10A6NI86 522 aa17■□□□□ 0.31
CBX4-204ENST00000495122 C2CD4BA6NLJ0 364 aa17■□□□□ 0.31
CBX4-204ENST00000495122 PTGESO14684 152 aa17■□□□□ 0.31
CBX4-204ENST00000495122 EOMESO95936 686 aa17■□□□□ 0.31
CBX4-204ENST00000495122 THP07101 528 aa17■□□□□ 0.31
CBX4-204ENST00000495122 CDKN2BP42772 138 aa17■□□□□ 0.31
CBX4-204ENST00000495122 LHX1P48742 406 aa17■□□□□ 0.31
CBX4-204ENST00000495122 ERVFC1P60507 584 aa17■□□□□ 0.31
CBX4-204ENST00000495122 SLC6A3Q01959 620 aa17■□□□□ 0.31
CBX4-204ENST00000495122 PLCB3Q01970 1234 aa17■□□□□ 0.31
CBX4-204ENST00000495122 KRT17Q04695 432 aa17■□□□□ 0.31
CBX4-204ENST00000495122 OR6B2Q6IFH4 312 aa17■□□□□ 0.31
CBX4-204ENST00000495122 ACOT1Q86TX2 421 aa17■□□□□ 0.31
CBX4-204ENST00000495122 JOSD2Q8TAC2 188 aa17■□□□□ 0.31
CBX4-204ENST00000495122 TEKT4Q8WW24 435 aa17■□□□□ 0.31
CBX4-204ENST00000495122 NKD2Q969F2 451 aaPredicted RBP17■□□□□ 0.31
CBX4-204ENST00000495122 UROC1Q96N76 676 aa17■□□□□ 0.31
CBX4-204ENST00000495122 VPS18Q9P253 973 aa17■□□□□ 0.31
CBX4-204ENST00000495122 FAN1Q9Y2M0 1017 aa17■□□□□ 0.31
CBX4-204ENST00000495122 TECTAO75443 2155 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 E5RJQ4 531 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 POLR3GO15318 223 aaPredicted RBP16.99■□□□□ 0.31
CBX4-204ENST00000495122 INPPL1O15357 1258 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 GPR37L1O60883 481 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 GJB6O95452 261 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 RDXP35241 583 aaKnown RBP16.99■□□□□ 0.31
CBX4-204ENST00000495122 HSD17B3P37058 310 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 PTPN9P43378 593 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 RPL21P46778 160 aaKnown RBP16.99■□□□□ 0.31
CBX4-204ENST00000495122 ORC1Q13415 861 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 TRADDQ15628 312 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 DUSP6Q16828 381 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 BOLA3Q53S33 107 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 TMEM31Q5JXX7 168 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 ZFYVE27Q5T4F4 411 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 PDE12Q6L8Q7 609 aaKnown RBP16.99■□□□□ 0.31
CBX4-204ENST00000495122 KCNT2Q6UVM3 1135 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 OLFML1Q6UWY5 402 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 ZDHHC24Q6UX98 284 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 MFSD7Q6UXD7 560 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 FAM183BPQ6ZVS7 135 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 BBS12Q6ZW61 710 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 SLC26A9Q7LBE3 791 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 RBM23Q86U06 439 aaKnown RBP16.99■□□□□ 0.31
CBX4-204ENST00000495122 TTC30AQ86WT1 665 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 DDX42Q86XP3 938 aaKnown RBP eCLIP16.99■□□□□ 0.31
CBX4-204ENST00000495122 RNF169Q8NCN4 708 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 SMRP1Q8NCR6 262 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 CMASQ8NFW8 434 aaPredicted RBP16.99■□□□□ 0.31
CBX4-204ENST00000495122 UBA3Q8TBC4 463 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 C1orf54Q8WWF1 131 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 ZNF558Q96NG5 402 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 HNRNPABQ99729 332 aaKnown RBP16.99■□□□□ 0.31
CBX4-204ENST00000495122 HINFPQ9BQA5 517 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 NEUROG2Q9H2A3 272 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 TLE6Q9H808 572 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 RSAD1Q9HA92 442 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 PRDM16Q9HAZ2 1276 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 ST7Q9NRC1 585 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 KLK14Q9P0G3 267 aa16.99■□□□□ 0.31
CBX4-204ENST00000495122 LRRD1A4D1F6 860 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 GOLGA6CA6NDK9 693 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 FAM86C2PA6NEL3 165 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 HMGB1P1B2RPK0 211 aaPredicted RBP16.98■□□□□ 0.31
CBX4-204ENST00000495122 GABRDO14764 452 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 XPO1O14980 1071 aaKnown RBP16.98■□□□□ 0.31
CBX4-204ENST00000495122 LIASO43766 372 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 TRUB2O95900 331 aaKnown RBP16.98■□□□□ 0.31
CBX4-204ENST00000495122 ITGAVP06756 1048 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 NUDT17P0C025 328 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 GOLGA6DP0CG33 693 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 ATF2P15336 505 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 PPM1AP35813 382 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 PBX3P40426 434 aa16.98■□□□□ 0.31
CBX4-204ENST00000495122 SOX4Q06945 474 aaPredicted RBP16.98■□□□□ 0.31
CBX4-204ENST00000495122 DHX9Q08211 1270 aaKnown RBP16.98■□□□□ 0.31
CBX4-204ENST00000495122 PDK2Q15119 407 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms