RNA–Protein interactions for RNA: ENST00000494872.5

TRIM2-209, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 2,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-209ENST00000494872 IZUMO2Q6UXV1 221 aa12.35□□□□□ -0.43
TRIM2-209ENST00000494872 APOBEC3FQ8IUX4 373 aaKnown RBP12.35□□□□□ -0.43
TRIM2-209ENST00000494872 NUDCD3Q8IVD9 361 aa12.35□□□□□ -0.43
TRIM2-209ENST00000494872 PPM1NQ8N819 430 aa12.35□□□□□ -0.43
TRIM2-209ENST00000494872 LRRC39Q96DD0 335 aa12.35□□□□□ -0.43
TRIM2-209ENST00000494872 ACAP3Q96P50 834 aa12.35□□□□□ -0.43
TRIM2-209ENST00000494872 PCYT2Q99447 389 aa12.35□□□□□ -0.43
TRIM2-209ENST00000494872 MRPL4Q9BYD3 311 aaKnown RBP12.35□□□□□ -0.43
TRIM2-209ENST00000494872 KRT38O76015 456 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 MIPP30301 263 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 STAT5BP51692 787 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 POLE2P56282 527 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 YWHAZP63104 245 aaKnown RBP12.34□□□□□ -0.43
TRIM2-209ENST00000494872 MRPS5P82675 430 aaKnown RBP12.34□□□□□ -0.43
TRIM2-209ENST00000494872 CNTN2Q02246 1040 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 FSTL1Q12841 308 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 CHI3L2Q15782 390 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 PRAMEF18Q5VWM3 479 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 ARCQ7LC44 396 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 PRPF39Q86UA1 669 aaKnown RBP12.34□□□□□ -0.43
TRIM2-209ENST00000494872 XYLT1Q86Y38 959 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 CTAGE3PQ8IX95 158 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 SLC4A11Q8NBS3 891 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 PPP2R3CQ969Q6 453 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 RTP4Q96DX8 246 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 TCHPQ9BT92 498 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 THTPAQ9BU02 230 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 MTMR12Q9C0I1 747 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 STN1Q9H668 368 aaKnown RBP12.34□□□□□ -0.43
TRIM2-209ENST00000494872 ASNSD1Q9NWL6 643 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 SLC7A8Q9UHI5 535 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 USP18Q9UMW8 372 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 FAM189A1O60320 539 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 CSDE1O75534 798 aaKnown RBP12.34□□□□□ -0.43
TRIM2-209ENST00000494872 TOM1L1O75674 476 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 RFPL1O75677 317 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 FARP2O94887 1054 aaPredicted RBP12.34□□□□□ -0.43
TRIM2-209ENST00000494872 AOC1P19801 751 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 UBA1P22314 1058 aaKnown RBP12.34□□□□□ -0.43
TRIM2-209ENST00000494872 CRHR1P34998 444 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 TNFSF9P41273 254 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 MAGEA6P43360 314 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 ASPAP45381 313 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 AQP5P55064 265 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 HNRNPDQ14103 355 aaKnown RBP12.34□□□□□ -0.43
TRIM2-209ENST00000494872 C1orf146Q5VVC0 180 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 IER5Q5VY09 327 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 SCARA3Q6AZY7 606 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 ZBTB33Q86T24 672 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 PRPF31Q8WWY3 499 aaKnown RBP12.34□□□□□ -0.43
TRIM2-209ENST00000494872 HSPH1Q92598 858 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 AZIN2Q96A70 460 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 KLRG1Q96E93 195 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 CFAP36Q96G28 342 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 CALN1Q9BXU9 219 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 ZDHHC7Q9NXF8 308 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 ZC3H7BQ9UGR2 993 aaKnown RBP12.34□□□□□ -0.43
TRIM2-209ENST00000494872 SOX13Q9UN79 622 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 FZD1Q9UP38 647 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 HBS1LQ9Y450 684 aaKnown RBP12.34□□□□□ -0.43
TRIM2-209ENST00000494872 AFG3L2Q9Y4W6 797 aa12.34□□□□□ -0.43
TRIM2-209ENST00000494872 OGTO15294 1046 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 MSCO60682 206 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 AP1G2O75843 785 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 BPGMP07738 259 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 OSBPP22059 807 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 KDSRQ06136 332 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 ZNF699Q32M78 642 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 NOL9Q5SY16 702 aaKnown RBP12.33□□□□□ -0.44
TRIM2-209ENST00000494872 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRIM2-209ENST00000494872 FBXO27Q8NI29 283 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 ACO2Q99798 780 aaKnown RBP12.33□□□□□ -0.44
TRIM2-209ENST00000494872 LBHD1Q9BQE6 289 aaPredicted RBP12.33□□□□□ -0.44
TRIM2-209ENST00000494872 MECRQ9BV79 373 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 VCX3BQ9H321 246 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 POPDC2Q9HBU9 364 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 DMAP1Q9NPF5 467 aaPredicted RBP12.33□□□□□ -0.44
TRIM2-209ENST00000494872 THAP1Q9NVV9 213 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 PCSK1NQ9UHG2 260 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 CYTH4Q9UIA0 394 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 SLC4A7Q9Y6M7 1214 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 TTLL13PA6NNM8 815 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 APOEP02649 317 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 UBTFL6P0CB48 400 aaPredicted RBP12.33□□□□□ -0.44
TRIM2-209ENST00000494872 CD19P15391 556 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 GABRB2P47870 512 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 SERPINB9P50453 376 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 SH3BGRP55822 239 aaPredicted RBP12.33□□□□□ -0.44
TRIM2-209ENST00000494872 XIAPP98170 497 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 CDC16Q13042 620 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 PDCD2Q16342 344 aaPredicted RBP12.33□□□□□ -0.44
TRIM2-209ENST00000494872 SH3D19Q5HYK7 790 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 STXBP5Q5T5C0 1151 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 C4orf22Q6V702 233 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 RFX8Q6ZV50 586 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 CCNJLQ8IV13 435 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 MCUQ8NE86 351 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 SEPT1Q8WYJ6 367 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 NCSTNQ92542 709 aa12.33□□□□□ -0.44
TRIM2-209ENST00000494872 MCRS1Q96EZ8 462 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms