RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 PLCG1P19174 1290 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 ITIH2P19823 946 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 CD33P20138 364 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 CA4P22748 312 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 ACAT1P24752 427 aaKnown RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 CALML3P27482 149 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 GCAP28676 217 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 TTKP33981 857 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 CHKAP35790 457 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 STAT2P52630 851 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 THOP1P52888 689 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 C21orf59P57076 290 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 TXNL4AP83876 142 aaKnown RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 FOLH1Q04609 750 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 KRT17Q04695 432 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 CHRNEQ04844 493 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 STK4Q13043 487 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SLC39A6Q13433 755 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 CCNIQ14094 377 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 LRP8Q14114 963 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 PTK2BQ14289 1009 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 C16orf72Q14CZ0 275 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 TNIP1Q15025 636 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 PRKD1Q15139 912 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 SEC23AQ15436 765 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SIX1Q15475 284 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 TEAD4Q15561 434 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 TRIP10Q15642 601 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 ZNF174Q15697 407 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SLC15A2Q16348 729 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 IL17AQ16552 155 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 FXNQ16595 210 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 GRAMD1BQ3KR37 738 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 KCTD21Q4G0X4 260 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 ARSHQ5FYA8 562 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 EFHC2Q5JST6 749 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 HP1BP3Q5SSJ5 553 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 CCNJQ5T5M9 372 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 C1orf146Q5VVC0 180 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SLX4IPQ5VYV7 408 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 LPCAT4Q643R3 524 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SCARA3Q6AZY7 606 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 DPY19L2P1Q6NXN4 242 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 CLEC4GQ6UXB4 293 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 RNF207Q6ZRF8 634 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 C1orf229Q6ZS94 237 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 FRA10AC1Q70Z53 315 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 ZNF571Q7Z3V5 609 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 RAB44Q7Z6P3 723 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 NOP9Q86U38 636 aaKnown RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 MTDHQ86UE4 582 aaKnown RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 NLRX1Q86UT6 975 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 GPR180Q86V85 440 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 CCDC25Q86WR0 208 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 CCDC105Q8IYK2 499 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 PQLC1Q8N2U9 271 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 ZNF713Q8N859 430 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 GOLM1Q8NBJ4 401 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 RBM15BQ8NDT2 890 aaKnown RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 ADCY4Q8NFM4 1077 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 OR7G1Q8NGA0 311 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 RFWD2Q8NHY2 731 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 UHMK1Q8TAS1 419 aaKnown RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 LNX1Q8TBB1 728 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 RAB3IL1Q8TBN0 382 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 TBC1D15Q8TC07 691 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SUN5Q8TC36 379 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SNX29Q8TEQ0 813 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 LRRC15Q8TF66 581 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 CHAC2Q8WUX2 184 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 ATL1Q8WXF7 558 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 RAPGEF4Q8WZA2 1011 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 MAML1Q92585 1016 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 TTC9Q92623 222 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 DLG3Q92796 817 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 CCDC127Q96BQ5 260 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 ALKBH8Q96BT7 664 aaKnown RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 TAMM41Q96BW9 452 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SDCCAG3Q96C92 435 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 ISOC1Q96CN7 298 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 RMDN1Q96DB5 314 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 C18orf8Q96DM3 657 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 PRR11Q96HE9 360 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 OXNAD1Q96HP4 312 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 EGLN2Q96KS0 407 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 RMDN3Q96TC7 470 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 TTC1Q99614 292 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 DHRS9Q9BPW9 319 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SYT11Q9BT88 431 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.83□□□□□ -1.96
MDC1-208ENST00000494654 CCDC106Q9BWC9 280 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 PLVAPQ9BX97 442 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 MROQ9BYG7 248 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 INO80BQ9C086 356 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 CEP44Q9C0F1 390 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 NAPBQ9H115 298 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 GOLPH3Q9H4A6 298 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 TRABDQ9H4I3 376 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 RNF41Q9H4P4 317 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 FAM96AQ9H5X1 160 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms