RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 BRI3BPQ8WY22 251 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.43□□□□□ -0.58
COL2A1-208ENST00000493991 ZNF669Q96BR6 464 aaPredicted RBP11.43□□□□□ -0.58
COL2A1-208ENST00000493991 DDX27Q96GQ7 796 aaKnown RBP11.43□□□□□ -0.58
COL2A1-208ENST00000493991 TTC25Q96NG3 672 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 SEPT5Q99719 369 aaPredicted RBP11.43□□□□□ -0.58
COL2A1-208ENST00000493991 RAB6CQ9H0N0 254 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.43□□□□□ -0.58
COL2A1-208ENST00000493991 WHRNQ9P202 907 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 PSMC3IPQ9P2W1 217 aaPredicted RBP11.43□□□□□ -0.58
COL2A1-208ENST00000493991 C15orf41Q9Y2V0 281 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 ZC3H4Q9UPT8 1303 aaKnown RBP11.43□□□□□ -0.58
COL2A1-208ENST00000493991 CFAP73A6NFT4 308 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 NEMP1O14524 444 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 TSPAN3O60637 253 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 KRT38O76015 456 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 JCHAINP01591 159 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 PYGBP11216 843 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 UNGP13051 313 aaPredicted RBP11.43□□□□□ -0.58
COL2A1-208ENST00000493991 BDNFP23560 247 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 COG7P83436 770 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 TSPY1Q01534 308 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 FSCN1Q16658 493 aaKnown RBP11.43□□□□□ -0.58
COL2A1-208ENST00000493991 BOLA3Q53S33 107 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 PIGZQ86VD9 579 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 RAET1EQ8TD07 263 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 PIWIL1Q96J94 861 aaKnown RBP11.43□□□□□ -0.58
COL2A1-208ENST00000493991 DDX50Q9BQ39 737 aaKnown RBP11.43□□□□□ -0.58
COL2A1-208ENST00000493991 FSD1LQ9BXM9 530 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 TRIM55Q9BYV6 548 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 TLK1Q9UKI8 766 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 STXBP5LQ9Y2K9 1186 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 CITO14578 2027 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 RRN3P2A6NIE6 340 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 BTNL10A8MVZ5 291 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 LIASO43766 372 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 ENTPD5O75356 428 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 ADRA1DP25100 572 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 GDF10P55107 478 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 KLHL38Q2WGJ6 581 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 GRAMD1BQ3KR37 738 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 ANKRD22Q5VYY1 191 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 TFAP2DQ7Z6R9 452 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 DDX60Q8IY21 1712 aaKnown RBP11.43□□□□□ -0.58
COL2A1-208ENST00000493991 ZDHHC14Q8IZN3 488 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 PYROXD2Q8N2H3 581 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 RUBCNQ92622 972 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 TRIM56Q9BRZ2 755 aaKnown RBP11.43□□□□□ -0.58
COL2A1-208ENST00000493991 ST6GALNAC4Q9H4F1 302 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 BFARQ9NZS9 450 aa11.43□□□□□ -0.58
COL2A1-208ENST00000493991 DNALI1O14645 258 aaPredicted RBP11.42□□□□□ -0.58
COL2A1-208ENST00000493991 CD4P01730 458 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 ENO1P06733 434 aaKnown RBP11.42□□□□□ -0.58
COL2A1-208ENST00000493991 GSTA1P08263 222 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 GSTA2P09210 222 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 GLRBP48167 497 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 SERPINB4P48594 390 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 ALDH18A1P54886 795 aaKnown RBP11.42□□□□□ -0.58
COL2A1-208ENST00000493991 SLC12A1Q13621 1099 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 KBTBD12Q3ZCT8 623 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 ANKRD20A2Q5SQ80 823 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 ANKRD20A1Q5TYW2 823 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 USP50Q70EL3 339 aaPredicted RBP11.42□□□□□ -0.58
COL2A1-208ENST00000493991 ARID3BQ8IVW6 561 aaPredicted RBP11.42□□□□□ -0.58
COL2A1-208ENST00000493991 SNRNP25Q9BV90 132 aaKnown RBP11.42□□□□□ -0.58
COL2A1-208ENST00000493991 NIFKQ9BYG3 293 aaKnown RBP11.42□□□□□ -0.58
COL2A1-208ENST00000493991 MAGEB5Q9BZ81 275 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 PDZD7Q9H5P4 517 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 ASB7Q9H672 318 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 IFT122Q9HBG6 1241 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 PCYOX1Q9UHG3 505 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 COQ4Q9Y3A0 265 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 RPS6KL1Q9Y6S9 549 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 STRNO43815 780 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 FAM155BO75949 473 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 THP07101 528 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 HOXC6P09630 235 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 IL1R2P27930 398 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 PSEN2P49810 448 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 GBE1Q04446 702 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 MBTD1Q05BQ5 628 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 MGAT5BQ3V5L5 792 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 ZNF618Q5T7W0 954 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 PLPPR4Q7Z2D5 763 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 GSDMBQ8TAX9 411 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 MIPOL1Q8TD10 442 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 TEKT4Q8WW24 435 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 C12orf42Q96LP6 360 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 ULBP1Q9BZM6 244 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 ZFYVE28Q9HCC9 887 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 VTA1Q9NP79 307 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 TMPRSS4Q9NRS4 437 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 GRHL1Q9NZI5 618 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 FAM8A1Q9UBU6 413 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 A0A0G2JLL6 359 aaPredicted RBP11.42□□□□□ -0.58
COL2A1-208ENST00000493991 H3BRJ5 948 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 TADA2AO75478 443 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 CRCPO75575 148 aa11.42□□□□□ -0.58
COL2A1-208ENST00000493991 LSM8O95777 96 aaKnown RBP11.42□□□□□ -0.58
COL2A1-208ENST00000493991 SKIP12755 728 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms