RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 SLC28A3Q9HAS3 691 aa12.08□□□□□ -0.48
BRCA1-222ENST00000493919 TRPC7Q9HCX4 862 aa12.08□□□□□ -0.48
BRCA1-222ENST00000493919 FAIMQ9NVQ4 179 aa12.08□□□□□ -0.48
BRCA1-222ENST00000493919 ANKFY1Q9P2R3 1169 aa12.08□□□□□ -0.48
BRCA1-222ENST00000493919 ZNF69Q9UC07 566 aa12.08□□□□□ -0.48
BRCA1-222ENST00000493919 PCDHA11Q9Y5I1 949 aa12.08□□□□□ -0.48
BRCA1-222ENST00000493919 ITIH6Q6UXX5 1313 aa12.08□□□□□ -0.48
BRCA1-222ENST00000493919 HNRNPDLO14979 420 aaKnown RBP12.07□□□□□ -0.48
BRCA1-222ENST00000493919 SERPINC1P01008 464 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 ALADP13716 330 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 M6PRP20645 277 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 IL10P22301 178 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 SP100P23497 879 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-222ENST00000493919 TMED10P49755 219 aaKnown RBP12.07□□□□□ -0.48
BRCA1-222ENST00000493919 FXR1P51114 621 aaKnown RBP eCLIP12.07□□□□□ -0.48
BRCA1-222ENST00000493919 TUBB2AQ13885 445 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 ZNF568Q3ZCX4 644 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 TMEM259Q4ZIN3 620 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 UBXN11Q5T124 520 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 NT5DC1Q5TFE4 455 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 EEF1DP3Q658K8 133 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 BTN2A1Q7KYR7 527 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 FMR1NBQ8N0W7 255 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-222ENST00000493919 C7orf57Q8NEG2 295 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 BCL7CQ8WUZ0 217 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-222ENST00000493919 FAM161BQ96MY7 647 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 FIZ1Q96SL8 496 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 C7orf25Q9BPX7 421 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 NTPCRQ9BSD7 190 aaKnown RBP12.07□□□□□ -0.48
BRCA1-222ENST00000493919 TUBB2BQ9BVA1 445 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 NXF3Q9H4D5 531 aaKnown RBP12.07□□□□□ -0.48
BRCA1-222ENST00000493919 PLSCR2Q9NRY7 297 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 FARSBQ9NSD9 589 aaKnown RBP12.07□□□□□ -0.48
BRCA1-222ENST00000493919 HES2Q9Y543 173 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 IPPQ9Y573 584 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 INSL6Q9Y581 213 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 TRAV6A0A075B6T7 132 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 GOLGA8IPA6NC78 632 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 MEIS3P2A8K0S8 358 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 NR1I2O75469 434 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 MYBP10242 640 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 RAC1P63000 192 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 ELF3P78545 371 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-222ENST00000493919 HPCAP84074 193 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 MOGQ16653 247 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 DUS1LQ6P1R4 473 aaKnown RBP12.07□□□□□ -0.48
BRCA1-222ENST00000493919 C6orf89Q6UWU4 347 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 CEP68Q76N32 757 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 MRPL10Q7Z7H8 261 aaKnown RBP12.07□□□□□ -0.48
BRCA1-222ENST00000493919 ZBTB33Q86T24 672 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 SLC17A8Q8NDX2 589 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 FGFBP2Q9BYJ0 223 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 SHCBP1LQ9BZQ2 653 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 PIF1Q9H611 641 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 OLFML3Q9NRN5 406 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 TBX20Q9UMR3 447 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 INPP5FQ9Y2H2 1132 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 TRANK1O15050 2925 aa12.07□□□□□ -0.48
BRCA1-222ENST00000493919 COL4A6Q14031 1691 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 MACROD2A1Z1Q3 448 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 CFAP73A6NFT4 308 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 E7ENQ6 273 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 GTPBP6O43824 516 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-222ENST00000493919 ARHGEF15O94989 841 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 ASLP04424 464 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 ITGA2BP08514 1039 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 CHRNB1P11230 501 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 PSMC2P35998 433 aaKnown RBP12.06□□□□□ -0.48
BRCA1-222ENST00000493919 LIG4P49917 911 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 CASP5P51878 434 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 UBE2HP62256 183 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 HTRA4P83105 476 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-222ENST00000493919 CCZ1BP86790 482 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 CCZ1P86791 482 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-222ENST00000493919 HLTFQ14527 1009 aaKnown RBP eCLIP12.06□□□□□ -0.483e-6■■□□□ 13.4
BRCA1-222ENST00000493919 FBXO43Q4G163 708 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 FAM26FQ5R3K3 315 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 ZBTB41Q5SVQ8 909 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 RNASEH2BQ5TBB1 312 aaKnown RBP12.06□□□□□ -0.48
BRCA1-222ENST00000493919 ZNF697Q5TEC3 545 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 UNC13DQ70J99 1090 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 SPOCK2Q92563 424 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 RBM18Q96H35 190 aaKnown RBP12.06□□□□□ -0.48
BRCA1-222ENST00000493919 PPP1R13BQ96KQ4 1090 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 CEP19Q96LK0 163 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 GDAP1L1Q96MZ0 367 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 TSG101Q99816 390 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 MTMR12Q9C0I1 747 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 ELAC1Q9H777 363 aaKnown RBP12.06□□□□□ -0.48
BRCA1-222ENST00000493919 C8orf33Q9H7E9 229 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-222ENST00000493919 CERS4Q9HA82 394 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 THAP1Q9NVV9 213 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 VANGL2Q9ULK5 521 aa12.06□□□□□ -0.48
BRCA1-222ENST00000493919 CETN3O15182 167 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 EOMESO95936 686 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 ITGA4P13612 1032 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 RPS2P15880 293 aaKnown RBP12.05□□□□□ -0.48
BRCA1-222ENST00000493919 FAM189BP81408 668 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 AP1B1Q10567 949 aa12.05□□□□□ -0.48
BRCA1-222ENST00000493919 STK11Q15831 433 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms