RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PRKAG3Q9UGI9 489 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 DRG1Q9Y295 367 aaKnown RBP8.09□□□□□ -1.11
BRCA1-221ENST00000493795 DNAJC16Q9Y2G8 782 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 A0A0X1KG70 313 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 KBTBD13C9JR72 458 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 BAIAP3O94812 1187 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 ASS1P00966 412 aaKnown RBP8.09□□□□□ -1.11
BRCA1-221ENST00000493795 LRG1P02750 347 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 NPR3P17342 541 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 FCHO2Q0JRZ9 810 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 TRMT5Q32P41 509 aaKnown RBP8.09□□□□□ -1.11
BRCA1-221ENST00000493795 KDM7AQ6ZMT4 941 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 UNC5CLQ8IV45 518 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 CCDC33Q8N5R6 958 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 LRRC17Q8N6Y2 441 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 WDR24Q96S15 920 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 DPY30Q9C005 99 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 NUAK2Q9H093 628 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 FAM49BQ9NUQ9 324 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 MAP10Q9P2G4 905 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 NAGPAQ9UK23 515 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 MGAT4AQ9UM21 535 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 UGGT2Q9NYU1 1516 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 MLH3Q9UHC1 1453 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 PMPCBO75439 489 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 ANXA6P08133 673 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 RBP3P10745 1247 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 NCAM1P13591 858 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 IRAK1P51617 712 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 BTN3A2P78410 334 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 DENND5BQ6ZUT9 1274 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 ARMCX6Q7L4S7 300 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 R3HCC1LQ7Z5L2 792 aaKnown RBP8.09□□□□□ -1.11
BRCA1-221ENST00000493795 IQCF2Q8IXL9 164 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 FAM172AQ8WUF8 416 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 RFT1Q96AA3 541 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 TPD52L3Q96J77 140 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 DCUN1D5Q9BTE7 237 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 TMEM120AQ9BXJ8 343 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 NFKBIZQ9BYH8 718 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 DSN1Q9H410 356 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 WDR19Q8NEZ3 1342 aa8.09□□□□□ -1.12
BRCA1-221ENST00000493795 A2MP01023 1474 aa8.09□□□□□ -1.12
BRCA1-221ENST00000493795 ZNF879B4DU55 563 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 UBDO15205 165 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 CLOCKO15516 846 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 AHCYL1O43865 530 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 GRAP2O75791 330 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 SNX4O95219 450 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 TMEM253P0C7T8 217 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 SLC2A4P14672 509 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 MSH3P20585 1137 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 COMTP21964 271 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 ALDH9A1P49189 494 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 FMO5P49326 533 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 EXOSC10Q01780 885 aaKnown RBP8.08□□□□□ -1.12
BRCA1-221ENST00000493795 TRAP1Q12931 704 aaKnown RBP8.08□□□□□ -1.12
BRCA1-221ENST00000493795 TOP3AQ13472 1001 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-221ENST00000493795 C5orf22Q49AR2 442 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 IER5Q5VY09 327 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 GDPD5Q8WTR4 605 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 SENP2Q9HC62 589 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 BARHL2Q9NY43 387 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 PPP2R3BQ9Y5P8 575 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 NPC1L1Q9UHC9 1359 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 ZW10O43264 779 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 CRTAMO95727 393 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 STAU1O95793 577 aaKnown RBP8.08□□□□□ -1.12
BRCA1-221ENST00000493795 LDLRP01130 860 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 ACLYP53396 1101 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 SEC24CP53992 1094 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 HIRAP54198 1017 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-221ENST00000493795 AQP5P55064 265 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 BIKQ13323 160 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 NAIF1Q69YI7 327 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-221ENST00000493795 RIPOR1Q6ZS17 1223 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 DHFR2Q86XF0 187 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 CAMK1DQ8IU85 385 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 PJA1Q8NG27 643 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 ACTRT2Q8TDY3 377 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 FAM118BQ9BPY3 351 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 TMEM106CQ9BVX2 250 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 VCPKMTQ9H867 229 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 VPS51Q9UID3 782 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 ITIH6Q6UXX5 1313 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 F5H5T6 163 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 IFRD1O00458 451 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-221ENST00000493795 SLC26A4O43511 780 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 PLA2G6O60733 806 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 CYP2C8P10632 490 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 PTPN4P29074 926 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 NMT1P30419 496 aaKnown RBP8.08□□□□□ -1.12
BRCA1-221ENST00000493795 STIP1P31948 543 aaKnown RBP8.08□□□□□ -1.12
BRCA1-221ENST00000493795 RASA2Q15283 850 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 EIF2S3LQ2VIR3 472 aaKnown RBP8.08□□□□□ -1.12
BRCA1-221ENST00000493795 CLEC4GQ6UXB4 293 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 APOBEC3FQ8IUX4 373 aaKnown RBP8.08□□□□□ -1.12
BRCA1-221ENST00000493795 ARHGEF19Q8IW93 802 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 REPS1Q96D71 796 aa8.08□□□□□ -1.12
BRCA1-221ENST00000493795 SEPHS2Q99611 448 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms