RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 CACNA2D1P54289 1103 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 CYP24A1Q07973 514 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 STARD3Q14849 445 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 C8orf34Q49A92 452 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 FAM35AQ86V20 835 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 TMEM25Q86YD3 366 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 SLC41A1Q8IVJ1 513 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 NAXDQ8IW45 347 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 XXYLT1Q8NBI6 393 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 CADM4Q8NFZ8 388 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 CLIC6Q96NY7 704 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 MED10Q9BTT4 135 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 BBS2Q9BXC9 721 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 DPEP3Q9H4B8 488 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 CD248Q9HCU0 757 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 ZDHHC4Q9NPG8 344 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 TLR8Q9NR97 1041 aaKnown RBP11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 AGPAT3Q9NRZ7 376 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 TMEM30AQ9NV96 361 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 DNAJC17Q9NVM6 304 aaKnown RBP11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 KIAA1522Q9P206 1035 aaPredicted RBP11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 CHORDC1Q9UHD1 332 aaPredicted RBP11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 NME7Q9Y5B8 376 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 ITPR1Q14643 2758 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 NBEAQ8NFP9 2946 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 A0A1B0GTW7 788 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 CLDN5O00501 218 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 TLR5O60602 858 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 FTH1P19P0C7X4 201 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 P4HA1P13674 534 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 TYRP14679 529 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 CD6P30203 668 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 ATP5C1P36542 298 aaKnown RBP11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 DGKGP49619 791 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 EGFLAMQ63HQ2 1017 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 CNNM4Q6P4Q7 775 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 KLHDC10Q6PID8 442 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 IL27RAQ6UWB1 636 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 EPM2AIP1Q7L775 607 aaPredicted RBP11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 TADA2BQ86TJ2 420 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 C12orf56Q8IXR9 622 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 DNASE2BQ8WZ79 361 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 CCDC127Q96BQ5 260 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 MRGPRX1Q96LB2 322 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 KCNK16Q96T55 309 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 TRIM9Q9C026 710 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 XYLT2Q9H1B5 865 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 CCDC86Q9H6F5 360 aaKnown RBP11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 CCSER2Q9H7U1 834 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 CYLDQ9NQC7 956 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 KBTBD4Q9NVX7 518 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 NXF1Q9UBU9 619 aaKnown RBP11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 CYP8B1Q9UNU6 501 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 GPSM3Q9Y4H4 160 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 CACNA1EQ15878 2313 aa11.63□□□□□ -0.55
SNRNP200-207ENST00000493271 FASNP49327 2511 aaKnown RBP11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 NEDD8-MDP1E9PL57 170 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 SH3BP5O60239 455 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 PHACTR2O75167 634 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 CER1O95813 267 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 OXTRP30559 389 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 MYL6P60660 151 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 FAM193AP78312 1265 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 SCAPQ12770 1279 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 GRIK2Q13002 908 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 SLC39A14Q15043 492 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 ZNF699Q32M78 642 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 ZNF667Q5HYK9 610 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 FAM26FQ5R3K3 315 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 CCNI2Q6ZMN8 369 aaPredicted RBP11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 TOGARAM2Q6ZUX3 1019 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 UNC93AQ86WB7 457 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 ZNF276Q8N554 614 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 RDH13Q8NBN7 331 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 SCAMP5Q8TAC9 235 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 GOLGA5Q8TBA6 731 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 PCED1AQ9H1Q7 454 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 MAGEF1Q9HAY2 307 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 CSNK1G1Q9HCP0 422 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 FSCN3Q9NQT6 498 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 GMIPQ9P107 970 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 DKK4Q9UBT3 224 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 HCN2Q9UL51 889 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 ZNF510Q9Y2H8 683 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 CEP192Q8TEP8 1941 aa11.62□□□□□ -0.55
SNRNP200-207ENST00000493271 LAMA5O15230 3695 aa11.61□□□□□ -0.55
SNRNP200-207ENST00000493271 MEI4A8MW99 385 aa11.61□□□□□ -0.55
SNRNP200-207ENST00000493271 TGFB1I1O43294 461 aa11.61□□□□□ -0.55
SNRNP200-207ENST00000493271 GREM1O60565 184 aa11.61□□□□□ -0.55
SNRNP200-207ENST00000493271 AP1G2O75843 785 aa11.61□□□□□ -0.55
SNRNP200-207ENST00000493271 CD2BP2O95400 341 aaKnown RBP11.61□□□□□ -0.55
SNRNP200-207ENST00000493271 IRF1P10914 325 aa11.61□□□□□ -0.55
SNRNP200-207ENST00000493271 HOXD13P35453 343 aa11.61□□□□□ -0.55
SNRNP200-207ENST00000493271 WASP42768 502 aa11.61□□□□□ -0.55
SNRNP200-207ENST00000493271 PSEN1P49768 467 aa11.61□□□□□ -0.55
SNRNP200-207ENST00000493271 CUL4AQ13619 759 aa11.61□□□□□ -0.55
SNRNP200-207ENST00000493271 BMT2Q1RMZ1 405 aa11.61□□□□□ -0.55
SNRNP200-207ENST00000493271 PAQR9Q6ZVX9 377 aa11.61□□□□□ -0.55
SNRNP200-207ENST00000493271 MIB1Q86YT6 1006 aa11.61□□□□□ -0.55
SNRNP200-207ENST00000493271 FUKQ8N0W3 1084 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms