RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 C8orf48Q96LL4 319 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 IRF2BPLQ9H1B7 796 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 BRD9Q9H8M2 597 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 TBC1D17Q9HA65 648 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 ADAM22Q9P0K1 906 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 CYTH4Q9UIA0 394 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 DENND4CQ5VZ89 1909 aa14.11□□□□□ -0.15
MSH6-208ENST00000493177 OBSL1O75147 1896 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 ZNF318Q5VUA4 2279 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 KRBA1A5PL33 1030 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 CALB1P05937 261 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 H2AFZP0C0S5 128 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 ATF6P18850 670 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 ABCB4P21439 1286 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 ACADSBP45954 432 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 NUBP1P53384 320 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 EPHA5P54756 1037 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 MLF2Q15773 248 aaPredicted RBP14.1□□□□□ -0.15
MSH6-208ENST00000493177 PTPN20Q4JDL3 420 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 C10orf76Q5T2E6 689 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 GPR158Q5T848 1215 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 MMS22LQ6ZRQ5 1243 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 H2AFVQ71UI9 128 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 PHLDB2Q86SQ0 1253 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 TMC8Q8IU68 726 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 SIX6OS1Q8N1H7 587 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 SHKBP1Q8TBC3 707 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 ATOH1Q92858 354 aaPredicted RBP14.1□□□□□ -0.15
MSH6-208ENST00000493177 SMARCD2Q92925 531 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 ZNF653Q96CK0 615 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 HSFY1Q96LI6 401 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 ASB16Q96NS5 453 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 CPXM1Q96SM3 734 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 TRMT61BQ9BVS5 477 aaKnown RBP14.1□□□□□ -0.15
MSH6-208ENST00000493177 MIS12Q9H081 205 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 CSNK1G1Q9HCP0 422 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 ZNF334Q9HCZ1 680 aaPredicted RBP14.1□□□□□ -0.15
MSH6-208ENST00000493177 TMEM30AQ9NV96 361 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 PCDHA13Q9Y5I0 950 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 MYH10P35580 1976 aa14.1□□□□□ -0.15
MSH6-208ENST00000493177 E5RJQ4 531 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 ZNF263O14978 683 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 GALR2O43603 387 aaPredicted RBP14.09□□□□□ -0.15
MSH6-208ENST00000493177 LCA5LO95447 670 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 CSH1P0DML2 217 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 CSH2P0DML3 217 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 SLC5A3P53794 718 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 GALCP54803 685 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 CYP4F8P98187 520 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 NHLH1Q02575 133 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 ADIGQ0VDE8 80 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 UBXN2BQ14CS0 331 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 SLC44A4Q53GD3 710 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 C2CD6Q53TS8 623 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 OR6B2Q6IFH4 312 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 PHF13Q86YI8 300 aaPredicted RBP14.09□□□□□ -0.15
MSH6-208ENST00000493177 MCOLN2Q8IZK6 566 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 STKLD1Q8NE28 680 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 STK32AQ8WU08 396 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 DEPDC1BQ8WUY9 529 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 CTNNBL1Q8WYA6 563 aaPredicted RBP14.09□□□□□ -0.15
MSH6-208ENST00000493177 KCTD13Q8WZ19 329 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 E2F7Q96AV8 911 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 C18orf8Q96DM3 657 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 TRIM11Q96F44 468 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 SLC4A5Q9BY07 1137 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 PACSIN1Q9BY11 444 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 PLA2G2FQ9BZM2 168 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 UBXN6Q9BZV1 441 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 ISCUQ9H1K1 167 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 MYO1AQ9UBC5 1043 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 TJP2Q9UDY2 1190 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 NENFQ9UMX5 172 aa14.09□□□□□ -0.15
MSH6-208ENST00000493177 PTPRDP23468 1912 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 ANKRD62A6NC57 917 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 H0Y858 1186 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 GOLGA8SH3BPF8 625 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 MOSPD3O75425 235 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 ERBB2P04626 1255 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 CCDC175P0C221 793 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 MYBL1P10243 752 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 PSMC3P17980 439 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 MMP8P22894 467 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 GDI1P31150 447 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 VIPR2P41587 438 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 TKTL1P51854 596 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 PRKCQQ04759 706 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 C1QBPQ07021 282 aaKnown RBP14.08□□□□□ -0.16
MSH6-208ENST00000493177 TPRG1Q6ZUI0 275 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 MON1BQ7L1V2 547 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 GPRIN1Q7Z2K8 1008 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 NUP93Q8N1F7 819 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 TXLNBQ8N3L3 684 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 CSGALNACT1Q8TDX6 532 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 IRF7Q92985 503 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 SPATA17Q96L03 361 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 ZSWIM3Q96MP5 696 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 PNPLA8Q9NP80 782 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 CYLDQ9NQC7 956 aa14.08□□□□□ -0.16
MSH6-208ENST00000493177 UXTQ9UBK9 157 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms