RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 IFT88Q13099 833 aa9.83□□□□□ -0.84
CSTF1-206ENST00000493039 SPA17Q15506 151 aa9.83□□□□□ -0.84
CSTF1-206ENST00000493039 C10orf76Q5T2E6 689 aa9.83□□□□□ -0.84
CSTF1-206ENST00000493039 LIN9Q5TKA1 542 aa9.83□□□□□ -0.84
CSTF1-206ENST00000493039 OR6B2Q6IFH4 312 aa9.83□□□□□ -0.84
CSTF1-206ENST00000493039 GAREM2Q75VX8 874 aa9.83□□□□□ -0.84
CSTF1-206ENST00000493039 RTL10Q7L3V2 364 aa9.83□□□□□ -0.84
CSTF1-206ENST00000493039 REXO1L1PQ8IX06 675 aa9.83□□□□□ -0.84
CSTF1-206ENST00000493039 SCML4Q8N228 414 aa9.83□□□□□ -0.84
CSTF1-206ENST00000493039 C17orf53Q8N3J3 647 aaPredicted RBP9.83□□□□□ -0.84
CSTF1-206ENST00000493039 DEFB123Q8N688 67 aa9.83□□□□□ -0.84
CSTF1-206ENST00000493039 JOSD2Q8TAC2 188 aa9.83□□□□□ -0.84
CSTF1-206ENST00000493039 PRKD2Q9BZL6 878 aa9.83□□□□□ -0.84
CSTF1-206ENST00000493039 OSGEPQ9NPF4 335 aa9.83□□□□□ -0.84
CSTF1-206ENST00000493039 MTMR10Q9NXD2 777 aa9.83□□□□□ -0.84
CSTF1-206ENST00000493039 DNMT3BQ9UBC3 853 aaKnown RBP9.83□□□□□ -0.84
CSTF1-206ENST00000493039 CNOT8Q9UFF9 292 aaKnown RBP9.83□□□□□ -0.84
CSTF1-206ENST00000493039 INTUQ9ULD6 942 aa9.83□□□□□ -0.84
CSTF1-206ENST00000493039 MAGED2Q9UNF1 606 aaPredicted RBP9.83□□□□□ -0.84
CSTF1-206ENST00000493039 PPP2R2CQ9Y2T4 447 aa9.83□□□□□ -0.84
CSTF1-206ENST00000493039 GOLGA8SH3BPF8 625 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 TBX10O75333 385 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 F11P03951 625 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 CALB1P05937 261 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 YWHAQP27348 245 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 RFC1P35251 1148 aaPredicted RBP9.82□□□□□ -0.84
CSTF1-206ENST00000493039 KRT83P78385 493 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 OGDHQ02218 1023 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 HS1BP3Q53T59 392 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 PPM1LQ5SGD2 360 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 SYPL2Q5VXT5 272 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 TMC5Q6UXY8 1006 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 SLC26A9Q7LBE3 791 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 SIX6OS1Q8N1H7 587 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 C3orf20Q8ND61 904 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 ZNF653Q96CK0 615 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 TRMT2BQ96GJ1 504 aaKnown RBP9.82□□□□□ -0.84
CSTF1-206ENST00000493039 SYNCQ9H7C4 482 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 AVENQ9NQS1 362 aaPredicted RBP9.82□□□□□ -0.84
CSTF1-206ENST00000493039 ZDHHC7Q9NXF8 308 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 GMIPQ9P107 970 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 MYO1AQ9UBC5 1043 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 FBXO9Q9UK97 447 aaPredicted RBP9.82□□□□□ -0.84
CSTF1-206ENST00000493039 MYH10P35580 1976 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 VCANP13611 3396 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 ANKRD33BA6NCL7 494 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 SIGLEC16A6NMB1 481 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 MOSPD3O75425 235 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 LRG1P02750 347 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 HNRNPA1P09651 372 aaKnown RBP eCLIP9.82□□□□□ -0.84
CSTF1-206ENST00000493039 CSH1P0DML2 217 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 CSH2P0DML3 217 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 NOP2P46087 812 aaKnown RBP9.82□□□□□ -0.84
CSTF1-206ENST00000493039 EPHA5P54756 1037 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 PITX1P78337 314 aaPredicted RBP9.82□□□□□ -0.84
CSTF1-206ENST00000493039 NTHL1P78549 312 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 TCEAL1Q15170 157 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 BSPRYQ5W0U4 402 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 ICE2Q659A1 982 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 EMC1Q8N766 993 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 SLC35G2Q8TBE7 412 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 KIAA1524Q8TCG1 905 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 S1PR5Q9H228 398 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 CALCOCO1Q9P1Z2 691 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 ASB3Q9Y575 518 aa9.82□□□□□ -0.84
CSTF1-206ENST00000493039 GREB1Q4ZG55 1949 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 MTCL1Q9Y4B5 1905 aaKnown RBP9.81□□□□□ -0.84
CSTF1-206ENST00000493039 PATJQ8NI35 1801 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 A0A1W2PQH9 124 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 ZNF840PA6NDX5 716 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 TMEM191CA6NGB0 347 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 FBXO21O94952 628 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 RTN3O95197 1032 aaPredicted RBP9.81□□□□□ -0.84
CSTF1-206ENST00000493039 CCDC175P0C221 793 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 MYBL1P10243 752 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 KRT3P12035 628 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 TFE3P19532 575 aaPredicted RBP9.81□□□□□ -0.84
CSTF1-206ENST00000493039 YWHAZP63104 245 aaKnown RBP9.81□□□□□ -0.84
CSTF1-206ENST00000493039 ZNF252P-AS1Q0IIN9 211 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 SLC5A9Q2M3M2 681 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 RAB6CQ53S08 254 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 FAM102AQ5T9C2 384 aaPredicted RBP9.81□□□□□ -0.84
CSTF1-206ENST00000493039 PPP1R2P3Q6NXS1 205 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 ANKRD54Q6NXT1 300 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 MON1AQ86VX9 555 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 ZDHHC17Q8IUH5 632 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 CMASQ8NFW8 434 aaPredicted RBP9.81□□□□□ -0.84
CSTF1-206ENST00000493039 CTNNBL1Q8WYA6 563 aaPredicted RBP9.81□□□□□ -0.84
CSTF1-206ENST00000493039 CASP10Q92851 521 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 FBXO32Q969P5 355 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 PPP2R3CQ969Q6 453 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 TCEAL4Q96EI5 215 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 BTBD6Q96KE9 485 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 CORO1BQ9BR76 489 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 APOL5Q9BWW9 433 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 IRX2Q9BZI1 471 aaPredicted RBP9.81□□□□□ -0.84
CSTF1-206ENST00000493039 RAB6CQ9H0N0 254 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 FBXO44Q9H4M3 255 aa9.81□□□□□ -0.84
CSTF1-206ENST00000493039 METTL5Q9NRN9 209 aaKnown RBP9.81□□□□□ -0.84
CSTF1-206ENST00000493039 PARVAQ9NVD7 372 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms