RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 SRPRBQ9Y5M8 271 aaKnown RBP14.04□□□□□ -0.16
USF1-206ENST00000491629 RAD54BQ9Y620 910 aa14.04□□□□□ -0.16
USF1-206ENST00000491629 FAM92AA1XBS5 289 aa14.03□□□□□ -0.16
USF1-206ENST00000491629 TGFB1I1O43294 461 aa14.03□□□□□ -0.16
USF1-206ENST00000491629 IRF1P10914 325 aa14.03□□□□□ -0.16
USF1-206ENST00000491629 CDH8P55286 799 aa14.03□□□□□ -0.16
USF1-206ENST00000491629 BNC1Q01954 994 aa14.03□□□□□ -0.16
USF1-206ENST00000491629 ALCAMQ13740 583 aa14.03□□□□□ -0.16
USF1-206ENST00000491629 RABEP1Q15276 862 aa14.03□□□□□ -0.16
USF1-206ENST00000491629 ANO4Q32M45 955 aa14.03□□□□□ -0.16
USF1-206ENST00000491629 WDR72Q3MJ13 1102 aa14.03□□□□□ -0.16
USF1-206ENST00000491629 HECTD3Q5T447 861 aa14.03□□□□□ -0.16
USF1-206ENST00000491629 TRMT11Q7Z4G4 463 aaKnown RBP14.03□□□□□ -0.16
USF1-206ENST00000491629 ZMIZ2Q8NF64 920 aa14.03□□□□□ -0.16
USF1-206ENST00000491629 MRGPRX1Q96LB2 322 aa14.03□□□□□ -0.16
USF1-206ENST00000491629 CCDC39Q9UFE4 941 aa14.03□□□□□ -0.16
USF1-206ENST00000491629 MYLKQ15746 1914 aa14.02□□□□□ -0.16
USF1-206ENST00000491629 CACNG3O60359 315 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 BEST1O76090 585 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 RTN3O95197 1032 aaPredicted RBP14.02□□□□□ -0.17
USF1-206ENST00000491629 TBX18O95935 607 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 FAM163BP0C2L3 166 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 CISD3P0C7P0 127 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 SLC5A3P53794 718 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 MYL6P60660 151 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 GRIK2Q13002 908 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 SLC14A1Q13336 389 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 HNRNPDQ14103 355 aaKnown RBP14.02□□□□□ -0.17
USF1-206ENST00000491629 PLEKHG6Q3KR16 790 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 BTBD8Q5XKL5 378 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 EPM2AIP1Q7L775 607 aaPredicted RBP14.02□□□□□ -0.17
USF1-206ENST00000491629 RABEPKQ7Z6M1 372 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 FAM35AQ86V20 835 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 MARCH9Q86YJ5 346 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 NAXDQ8IW45 347 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 RDH13Q8NBN7 331 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 PDZD8Q8NEN9 1154 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 PLEKHO2Q8TD55 490 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 CGRRF1Q99675 332 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 SDCBP2Q9H190 292 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 IL21RQ9HBE5 538 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 DNAJC17Q9NVM6 304 aaKnown RBP14.02□□□□□ -0.17
USF1-206ENST00000491629 OSER1Q9NX31 292 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 TOR4AQ9NXH8 423 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 CACNA2D2Q9NY47 1150 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 SMC3Q9UQE7 1217 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 SH3BP1Q9Y3L3 701 aa14.02□□□□□ -0.17
USF1-206ENST00000491629 A8MXQ7 604 aa14.01□□□□□ -0.17
USF1-206ENST00000491629 KCNJ18B7U540 433 aa14.01□□□□□ -0.17
USF1-206ENST00000491629 NEDD8-MDP1E9PL57 170 aa14.01□□□□□ -0.17
USF1-206ENST00000491629 KIAA0391O15091 583 aaKnown RBP14.01□□□□□ -0.17
USF1-206ENST00000491629 ZNF217O75362 1048 aa14.01□□□□□ -0.17
USF1-206ENST00000491629 SYPP08247 313 aa14.01□□□□□ -0.17
USF1-206ENST00000491629 DLATP10515 647 aaKnown RBP14.01□□□□□ -0.17
USF1-206ENST00000491629 TUBP50607 506 aa14.01□□□□□ -0.17
USF1-206ENST00000491629 SURF1Q15526 300 aa14.01□□□□□ -0.17
USF1-206ENST00000491629 SNRNP35Q16560 246 aaKnown RBP14.01□□□□□ -0.17
USF1-206ENST00000491629 GRAMD4Q6IC98 578 aa14.01□□□□□ -0.17
USF1-206ENST00000491629 HTR3DQ70Z44 454 aa14.01□□□□□ -0.17
USF1-206ENST00000491629 CHPFQ8IZ52 775 aa14.01□□□□□ -0.17
USF1-206ENST00000491629 FUKQ8N0W3 1084 aa14.01□□□□□ -0.17
USF1-206ENST00000491629 BAHD1Q8TBE0 780 aaPredicted RBP14.01□□□□□ -0.17
USF1-206ENST00000491629 SMOQ99835 787 aa14.01□□□□□ -0.17
USF1-206ENST00000491629 KLF16Q9BXK1 252 aaPredicted RBP14.01□□□□□ -0.17
USF1-206ENST00000491629 SMYD3Q9H7B4 428 aa14.01□□□□□ -0.17
USF1-206ENST00000491629 PCOLCE2Q9UKZ9 415 aa14.01□□□□□ -0.17
USF1-206ENST00000491629 R3HCC1Q9Y3T6 440 aaKnown RBP14.01□□□□□ -0.17
USF1-206ENST00000491629 MUC22E2RYF6 1773 aaPredicted RBP14.01□□□□□ -0.17
USF1-206ENST00000491629 PLXNA2O75051 1894 aa14□□□□□ -0.17
USF1-206ENST00000491629 PTPRQQ9UMZ3 2332 aa14□□□□□ -0.17
USF1-206ENST00000491629 CLIC2O15247 247 aa14□□□□□ -0.17
USF1-206ENST00000491629 DKK1O94907 266 aa14□□□□□ -0.17
USF1-206ENST00000491629 STAU1O95793 577 aaKnown RBP14□□□□□ -0.17
USF1-206ENST00000491629 TYRP14679 529 aa14□□□□□ -0.17
USF1-206ENST00000491629 TNNI1P19237 187 aa14□□□□□ -0.17
USF1-206ENST00000491629 RDXP35241 583 aaKnown RBP14□□□□□ -0.17
USF1-206ENST00000491629 CYP24A1Q07973 514 aa14□□□□□ -0.17
USF1-206ENST00000491629 PSMD6Q15008 389 aa14□□□□□ -0.17
USF1-206ENST00000491629 TPGS1Q6ZTW0 290 aa14□□□□□ -0.17
USF1-206ENST00000491629 GLRX5Q86SX6 157 aa14□□□□□ -0.17
USF1-206ENST00000491629 RGL4Q8IZJ4 473 aa14□□□□□ -0.17
USF1-206ENST00000491629 DNASE2BQ8WZ79 361 aa14□□□□□ -0.17
USF1-206ENST00000491629 CCDC127Q96BQ5 260 aa14□□□□□ -0.17
USF1-206ENST00000491629 CCDC86Q9H6F5 360 aaKnown RBP14□□□□□ -0.17
USF1-206ENST00000491629 AGPAT3Q9NRZ7 376 aa14□□□□□ -0.17
USF1-206ENST00000491629 WSB2Q9NYS7 404 aaPredicted RBP14□□□□□ -0.17
USF1-206ENST00000491629 MARK1Q9P0L2 795 aa14□□□□□ -0.17
USF1-206ENST00000491629 NXF1Q9UBU9 619 aaKnown RBP14□□□□□ -0.17
USF1-206ENST00000491629 FBXO10Q9UK96 956 aa14□□□□□ -0.17
USF1-206ENST00000491629 RAXQ9Y2V3 346 aa14□□□□□ -0.17
USF1-206ENST00000491629 SLCO1B1Q9Y6L6 691 aa14□□□□□ -0.17
USF1-206ENST00000491629 TENM4Q6N022 2769 aa13.99□□□□□ -0.17
USF1-206ENST00000491629 TLR5O60602 858 aa13.99□□□□□ -0.17
USF1-206ENST00000491629 STAT6P42226 847 aa13.99□□□□□ -0.17
USF1-206ENST00000491629 CASP4P49662 377 aa13.99□□□□□ -0.17
USF1-206ENST00000491629 TNNC1P63316 161 aa13.99□□□□□ -0.17
USF1-206ENST00000491629 CEBPZQ03701 1054 aaKnown RBP13.99□□□□□ -0.17
USF1-206ENST00000491629 CCDC73Q6ZRK6 1079 aa13.99□□□□□ -0.17
USF1-206ENST00000491629 GPRIN1Q7Z2K8 1008 aa13.99□□□□□ -0.17
USF1-206ENST00000491629 PDILTQ8N807 584 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms