RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 C10orf82Q8WW14 230 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 TRIM6Q9C030 488 aaPredicted RBP16.34■□□□□ 0.21
BRD9-208ENST00000489816 SMYD2Q9NRG4 433 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 SEPT10Q9P0V9 454 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 HEY2Q9UBP5 337 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 ZFP69BQ9UJL9 534 aa16.34■□□□□ 0.21
BRD9-208ENST00000489816 SPDYE5A6NIY4 337 aa16.33■□□□□ 0.21
BRD9-208ENST00000489816 UPP2O95045 317 aa16.33■□□□□ 0.21
BRD9-208ENST00000489816 ATP2A2P16615 1042 aaKnown RBP16.33■□□□□ 0.21
BRD9-208ENST00000489816 OSBPP22059 807 aa16.33■□□□□ 0.21
BRD9-208ENST00000489816 HDAC4P56524 1084 aa16.33■□□□□ 0.21
BRD9-208ENST00000489816 ZCCHC23Q6ZST2 131 aa16.33■□□□□ 0.21
BRD9-208ENST00000489816 CTU1Q7Z7A3 348 aaKnown RBP16.33■□□□□ 0.21
BRD9-208ENST00000489816 DPP9Q86TI2 863 aa16.33■□□□□ 0.21
BRD9-208ENST00000489816 BANPQ8N9N5 519 aa16.33■□□□□ 0.21
BRD9-208ENST00000489816 ARMC2Q8NEN0 867 aa16.33■□□□□ 0.21
BRD9-208ENST00000489816 APOL1O14791 398 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 ENTPD5O75356 428 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 ACAT1P24752 427 aaKnown RBP16.33■□□□□ 0.2
BRD9-208ENST00000489816 SERPINB3P29508 390 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 SESN3P58005 492 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 GRIK4Q16099 956 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 KLHL38Q2WGJ6 581 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 CES3Q6UWW8 571 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 ASRGL1Q7L266 308 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 LONP2Q86WA8 852 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 TP53INP2Q8IXH6 220 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 KHSRPQ92945 711 aaKnown RBP eCLIP16.33■□□□□ 0.2
BRD9-208ENST00000489816 C16orf70Q9BSU1 422 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 TBC1D10AQ9BXI6 508 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 IQCGQ9H095 443 aaKnown RBP16.33■□□□□ 0.2
BRD9-208ENST00000489816 RNF39Q9H2S5 420 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 ASB7Q9H672 318 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 KANSL3Q9P2N6 904 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 HESX1Q9UBX0 185 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 ZMYND8Q9ULU4 1186 aaPredicted RBP16.33■□□□□ 0.2
BRD9-208ENST00000489816 RGPD3A6NKT7 1758 aaPredicted RBP16.33■□□□□ 0.2
BRD9-208ENST00000489816 RGPD4Q7Z3J3 1758 aa16.33■□□□□ 0.2
BRD9-208ENST00000489816 FAM237BA0A1B0GVD1 139 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 YWHAZP63104 245 aaKnown RBP16.32■□□□□ 0.2
BRD9-208ENST00000489816 SOWAHAQ2M3V2 549 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 LCLAT1Q6UWP7 414 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 CCDC185Q8N715 623 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 MZB1Q8WU39 189 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 LGMNQ99538 433 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 GBA2Q9HCG7 927 aaPredicted RBP16.32■□□□□ 0.2
BRD9-208ENST00000489816 TEX264Q9Y6I9 313 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 ADCY6O43306 1168 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 CYP2F1P24903 491 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 SLC8A1P32418 973 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 GTF2A2P52657 109 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 OLFML1Q6UWY5 402 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 TTC8Q8TAM2 541 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 ADAM32Q8TC27 787 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 KCNN1Q92952 543 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 GRAMD1AQ96CP6 724 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 TSSK1BQ9BXA7 367 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 SENP1Q9P0U3 644 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 CLDN5O00501 218 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 GM2AP17900 193 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 TNFAIP2Q03169 654 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 TFDP2Q14188 446 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 DENND5BQ6ZUT9 1274 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 CAND1Q86VP6 1230 aaKnown RBP16.32■□□□□ 0.2
BRD9-208ENST00000489816 MAP7D3Q8IWC1 876 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 SGIP1Q9BQI5 828 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 PCMTD2Q9NV79 361 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.32■□□□□ 0.2
BRD9-208ENST00000489816 PTPRFP10586 1907 aa16.32■□□□□ 0.2
BRD9-208ENST00000489816 CXCL11O14625 94 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 DYNC1LI2O43237 492 aaPredicted RBP16.31■□□□□ 0.2
BRD9-208ENST00000489816 STIP1P31948 543 aaKnown RBP16.31■□□□□ 0.2
BRD9-208ENST00000489816 SESN2P58004 480 aaPredicted RBP16.31■□□□□ 0.2
BRD9-208ENST00000489816 LAMC2Q13753 1193 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 NAA25Q14CX7 972 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 TAZQ16635 292 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 MARCH8Q5T0T0 291 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 FYB2Q5VWT5 728 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 KCNT2Q6UVM3 1135 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 EXOC8Q8IYI6 725 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 ZNF276Q8N554 614 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 ANK1P16157 1881 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 A0A1B0GUA9 196 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 E7ESA3 106 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 ZWINTO95229 277 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 GOT1P17174 413 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 GABRB2P47870 512 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 SLC26A2P50443 739 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 KCNJ11Q14654 390 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 MAMDC4Q6UXC1 1216 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 SLC7A6OSQ96CW6 309 aaPredicted RBP16.31■□□□□ 0.2
BRD9-208ENST00000489816 ATXN7L3BQ96GX2 97 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 EFR3BQ9Y2G0 817 aa16.31■□□□□ 0.2
BRD9-208ENST00000489816 COPEO14579 308 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 CREB3O43889 395 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 CSH1P0DML2 217 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 CSH2P0DML3 217 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 HOXA11P31270 313 aaPredicted RBP16.3■□□□□ 0.2
BRD9-208ENST00000489816 PCK1P35558 622 aa16.3■□□□□ 0.2
BRD9-208ENST00000489816 SLC6A3Q01959 620 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms