RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 USP3Q9Y6I4 520 aa14.21□□□□□ -0.13
LMO4-203ENST00000489303 OBSL1O75147 1896 aa14.21□□□□□ -0.14
LMO4-203ENST00000489303 DENND4CQ5VZ89 1909 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 A0A1W2PQH9 124 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 K7ESF4 209 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 XPO1O14980 1071 aaKnown RBP14.2□□□□□ -0.14
LMO4-203ENST00000489303 ATG13O75143 517 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 ADH1CP00326 375 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 SETSIPP0DME0 302 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 IRF1P10914 325 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 GALK1P51570 392 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 TKTL1P51854 596 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 MFAP3P55082 362 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 ZXDBP98169 803 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 PDE4CQ08493 712 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 SPEM2Q0P670 501 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 CCINQ13939 588 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 DPCR1Q3MIW9 517 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 FBXO43Q4G163 708 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 C10orf120Q5SQS8 335 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 KLHDC10Q6PID8 442 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 ENOSF1Q7L5Y1 443 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 TTC30AQ86WT1 665 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 ADGRG2Q8IZP9 1017 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 RBBP8NLQ8NC74 664 aaPredicted RBP14.2□□□□□ -0.14
LMO4-203ENST00000489303 UBE2TQ9NPD8 197 aaPredicted RBP14.2□□□□□ -0.14
LMO4-203ENST00000489303 CLIC5Q9NZA1 410 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 DNMT3LQ9UJW3 386 aa14.2□□□□□ -0.14
LMO4-203ENST00000489303 GREB1Q4ZG55 1949 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 O00370 1275 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 MBD3O95983 291 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 ZBED1O96006 694 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 KRT5P13647 590 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 PRKCSHP14314 528 aaPredicted RBP14.19□□□□□ -0.14
LMO4-203ENST00000489303 PLA2G4AP47712 749 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 PXNP49023 591 aaPredicted RBP14.19□□□□□ -0.14
LMO4-203ENST00000489303 ATXN1P54253 815 aaKnown RBP14.19□□□□□ -0.14
LMO4-203ENST00000489303 PUM1Q14671 1186 aaKnown RBP eCLIP14.19□□□□□ -0.14
LMO4-203ENST00000489303 DHCR24Q15392 516 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 CNGA2Q16280 664 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 EXOC3L4Q17RC7 722 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 RAB41Q5JT25 222 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 BTBD8Q5XKL5 378 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 FSTL4Q6MZW2 842 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 LCLAT1Q6UWP7 414 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 PRR23BQ6ZRT6 265 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 RSRC2Q7L4I2 434 aaKnown RBP14.19□□□□□ -0.14
LMO4-203ENST00000489303 ARHGEF19Q8IW93 802 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 SIX6OS1Q8N1H7 587 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 UBA3Q8TBC4 463 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 KAT5Q92993 513 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 NMUR1Q9HB89 426 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 FBRSL1Q9HCM7 1045 aaKnown RBP14.19□□□□□ -0.14
LMO4-203ENST00000489303 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.19□□□□□ -0.14
LMO4-203ENST00000489303 USP18Q9UMW8 372 aa14.19□□□□□ -0.14
LMO4-203ENST00000489303 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.19□□□□□ -0.14
LMO4-203ENST00000489303 ZNF638Q14966 1978 aaKnown RBP14.18□□□□□ -0.14
LMO4-203ENST00000489303 DCDC2BA2VCK2 349 aa14.18□□□□□ -0.14
LMO4-203ENST00000489303 GTPBP10A4D1E9 387 aaKnown RBP14.18□□□□□ -0.14
LMO4-203ENST00000489303 SCAMP3O14828 347 aaKnown RBP14.18□□□□□ -0.14
LMO4-203ENST00000489303 MED7O43513 233 aa14.18□□□□□ -0.14
LMO4-203ENST00000489303 TBX18O95935 607 aa14.18□□□□□ -0.14
LMO4-203ENST00000489303 CYP17A1P05093 508 aa14.18□□□□□ -0.14
LMO4-203ENST00000489303 PGFP49763 221 aa14.18□□□□□ -0.14
LMO4-203ENST00000489303 YWHAGP61981 247 aaKnown RBP eCLIP14.18□□□□□ -0.14
LMO4-203ENST00000489303 COG7P83436 770 aa14.18□□□□□ -0.14
LMO4-203ENST00000489303 GAD2Q05329 585 aa14.18□□□□□ -0.14
LMO4-203ENST00000489303 MAN2A1Q16706 1144 aa14.18□□□□□ -0.14
LMO4-203ENST00000489303 PREPLQ4J6C6 727 aaPredicted RBP14.18□□□□□ -0.14
LMO4-203ENST00000489303 TRIM65Q6PJ69 517 aa14.18□□□□□ -0.14
LMO4-203ENST00000489303 SASS6Q6UVJ0 657 aa14.18□□□□□ -0.14
LMO4-203ENST00000489303 ZNF276Q8N554 614 aa14.18□□□□□ -0.14
LMO4-203ENST00000489303 ZFRQ96KR1 1074 aaKnown RBP14.18□□□□□ -0.14
LMO4-203ENST00000489303 MED15Q96RN5 788 aa14.18□□□□□ -0.14
LMO4-203ENST00000489303 CRACR2AQ9BSW2 395 aa14.18□□□□□ -0.14
LMO4-203ENST00000489303 KLF16Q9BXK1 252 aaPredicted RBP14.18□□□□□ -0.14
LMO4-203ENST00000489303 OSER1Q9NX31 292 aa14.18□□□□□ -0.14
LMO4-203ENST00000489303 STRIP2Q9ULQ0 834 aa14.18□□□□□ -0.14
LMO4-203ENST00000489303 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.18□□□□□ -0.14
LMO4-203ENST00000489303 ANTXRLA6NF34 631 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.17□□□□□ -0.14
LMO4-203ENST00000489303 M0QYV0 167 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 PES1O00541 588 aaKnown RBP14.17□□□□□ -0.14
LMO4-203ENST00000489303 EGFP01133 1207 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 ADH5P11766 374 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 BRD2P25440 801 aaKnown RBP14.17□□□□□ -0.14
LMO4-203ENST00000489303 PM20D1Q6GTS8 502 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 HTR3DQ70Z44 454 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 SCD5Q86SK9 330 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 MIB1Q86YT6 1006 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 IRF2BP1Q8IU81 584 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 GPT2Q8TD30 523 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 RNF139Q8WU17 664 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 KCTD13Q8WZ19 329 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 TFAP2BQ92481 460 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 GOLGA1Q92805 767 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 KREMEN1Q96MU8 473 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 TUBGCP2Q9BSJ2 902 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 ULBP1Q9BZM6 244 aa14.17□□□□□ -0.14
LMO4-203ENST00000489303 OLA1Q9NTK5 396 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms