RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 NXF3Q9H4D5 531 aaKnown RBP6.92□□□□□ -1.3
HDLBP-243ENST00000488923 ZWILCHQ9H900 591 aa6.92□□□□□ -1.3
HDLBP-243ENST00000488923 UBN1Q9NPG3 1134 aa6.92□□□□□ -1.3
HDLBP-243ENST00000488923 RCOR3Q9P2K3 495 aaPredicted RBP6.92□□□□□ -1.3
HDLBP-243ENST00000488923 TUBGCP4Q9UGJ1 667 aa6.92□□□□□ -1.3
HDLBP-243ENST00000488923 GTF2IRD1Q9UHL9 959 aa6.92□□□□□ -1.3
HDLBP-243ENST00000488923 SLC12A6Q9UHW9 1150 aa6.92□□□□□ -1.3
HDLBP-243ENST00000488923 CYTH4Q9UIA0 394 aa6.92□□□□□ -1.3
HDLBP-243ENST00000488923 PRDM4Q9UKN5 801 aa6.92□□□□□ -1.3
HDLBP-243ENST00000488923 DNPEPQ9ULA0 475 aa6.92□□□□□ -1.3
HDLBP-243ENST00000488923 R3HDM2Q9Y2K5 976 aaKnown RBP6.92□□□□□ -1.3
HDLBP-243ENST00000488923 GIT1Q9Y2X7 761 aa6.92□□□□□ -1.3
HDLBP-243ENST00000488923 IPPQ9Y573 584 aa6.92□□□□□ -1.3
HDLBP-243ENST00000488923 TLDC2A0PJX2 215 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 C3orf70A6NLC5 250 aaPredicted RBP6.91□□□□□ -1.3
HDLBP-243ENST00000488923 FIGNL2A6NMB9 653 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 E7EVH7 732 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 APOL1O14791 398 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 ALOX15BO15296 676 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 SEPT4O43236 478 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 ADCY6O43306 1168 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 TRAPPC3O43617 180 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 CABYRO75952 493 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 KIAA0754O94854 1291 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 FBXO21O94952 628 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 GJB6O95452 261 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 C6orf222P0C671 652 aaPredicted RBP6.91□□□□□ -1.3
HDLBP-243ENST00000488923 CYBAP13498 195 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 FGFR4P22455 802 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 MAGEA4P43358 317 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 MMP13P45452 471 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 NR2C2P49116 596 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 ATP1A2P50993 1020 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 ZNF135P52742 658 aaPredicted RBP6.91□□□□□ -1.3
HDLBP-243ENST00000488923 CDH6P55285 790 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 ARL4CP56559 192 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 EIF3EP60228 445 aaKnown RBP6.91□□□□□ -1.3
HDLBP-243ENST00000488923 OTUD4Q01804 1114 aaKnown RBP6.91□□□□□ -1.3
HDLBP-243ENST00000488923 ROR1Q01973 937 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 TMEM62Q0P6H9 643 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 GPS1Q13098 491 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 XRCC4Q13426 336 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 AGERQ15109 404 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 NOMO1Q15155 1222 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 HIF1AQ16665 826 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 SOWAHAQ2M3V2 549 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 TNFAIP8L3Q5GJ75 292 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 GNASQ5JWF2 1037 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 UBXN11Q5T124 520 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 PPP1R26Q5T8A7 1209 aaPredicted RBP6.91□□□□□ -1.3
HDLBP-243ENST00000488923 FAM183BPQ6ZVS7 135 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 ACOT1Q86TX2 421 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 BPHLQ86WA6 291 aaPredicted RBP6.91□□□□□ -1.3
HDLBP-243ENST00000488923 TTC30AQ86WT1 665 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 CDKL3Q8IVW4 592 aaPredicted RBP6.91□□□□□ -1.3
HDLBP-243ENST00000488923 ADGRF2Q8IZF7 708 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 OR2W6PQ8NHA6 318 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 UBA3Q8TBC4 463 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 ACTL9Q8TC94 416 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 KCTD13Q8WZ19 329 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 C18orf25Q96B23 403 aaPredicted RBP6.91□□□□□ -1.3
HDLBP-243ENST00000488923 PGBD4Q96DM1 585 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 UROC1Q96N76 676 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 RNF157Q96PX1 679 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 RBM15Q96T37 977 aaKnown RBP eCLIP6.91□□□□□ -1.3
HDLBP-243ENST00000488923 HNRNPABQ99729 332 aaKnown RBP6.91□□□□□ -1.3
HDLBP-243ENST00000488923 MRPL45Q9BRJ2 306 aaKnown RBP6.91□□□□□ -1.3
HDLBP-243ENST00000488923 HERPUD2Q9BSE4 406 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 CALN1Q9BXU9 219 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 CCDC134Q9H6E4 229 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 RRN3Q9NYV6 651 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 NINJ2Q9NZG7 142 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 FLRT1Q9NZU1 646 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 PAK5Q9P286 719 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 HMGXB4Q9UGU5 601 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 LGALS13Q9UHV8 139 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 SLC24A2Q9UI40 661 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 STAP1Q9ULZ2 295 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 SQORQ9Y6N5 450 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 GRIN2DO15399 1336 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 RALGAPA2Q2PPJ7 1873 aa6.91□□□□□ -1.3
HDLBP-243ENST00000488923 MCM3APO60318 1980 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 SLC35F4A4IF30 521 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 TP73O15350 636 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 ZNF623O75123 536 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 ACSL3O95573 720 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 SHBGP04278 402 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 THP07101 528 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 PFKMP08237 780 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 GSTA2P09210 222 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 RBP3P10745 1247 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 IL1R2P27930 398 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 CST5P28325 142 aaPredicted RBP6.9□□□□□ -1.3
HDLBP-243ENST00000488923 HOXD10P28358 340 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 PCSK1P29120 753 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 VPS41P49754 854 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 SLC18A1P54219 525 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 SRSF11Q05519 484 aaKnown RBP6.9□□□□□ -1.3
HDLBP-243ENST00000488923 ORC1Q13415 861 aa6.9□□□□□ -1.3
HDLBP-243ENST00000488923 AUHQ13825 339 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms