RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 RAPGEF1Q13905 1077 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 DHCR24Q15392 516 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 ZNF528Q3MIS6 628 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 TCP11X2Q5H9J9 407 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 ADGRG2Q8IZP9 1017 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 GPT2Q8TD30 523 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 PNKPQ96T60 521 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 ULBP1Q9BZM6 244 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 SYNCQ9H7C4 482 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 CYLDQ9NQC7 956 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 CNGB3Q9NQW8 809 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 ABCC13Q9NSE7 274 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 RBM12Q9NTZ6 932 aaKnown RBP11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 MARCH2Q9P0N8 246 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 DLGAP2Q9P1A6 1054 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 WDR35Q9P2L0 1181 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 NUDT5Q9UKK9 219 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 PCDHGA2Q9Y5H1 932 aa11.76□□□□□ -0.53
ARHGEF39-204ENST00000488918 SLC12A8A0AV02 714 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 GFRA3O60609 400 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 TBX18O95935 607 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 SLC9A1P19634 815 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 RGS7P49802 495 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 TPM4P67936 248 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 MYL5Q02045 173 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 TMEM196Q5HYL7 178 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 TXNDC11Q6PKC3 985 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 TTC30AQ86WT1 665 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 CCDC117Q8IWD4 279 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 LMO3Q8TAP4 145 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 ENOX1Q8TC92 643 aaKnown RBP11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 KCTD13Q8WZ19 329 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 KAT5Q92993 513 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 FAM149B1Q96BN6 582 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 HSFY1Q96LI6 401 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 SPHK2Q9NRA0 654 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 ZSCAN32Q9NX65 697 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 DNAJC12Q9UKB3 198 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 USP3Q9Y6I4 520 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 R4GN57 208 aa11.75□□□□□ -0.53
ARHGEF39-204ENST00000488918 NUP210Q8TEM1 1887 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 TYW5A2RUC4 315 aaKnown RBP11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 TBC1D3BA6NDS4 549 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 SMTNL1A8MU46 457 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 BECN2A8MW95 431 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 NEDD8-MDP1E9PL57 170 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 RNF40O75150 1001 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 LMNAP02545 664 aaKnown RBP11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 CYP17A1P05093 508 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 PON1P27169 355 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 NBL1P41271 181 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 SEC13P55735 322 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 E2F5Q15329 346 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 SYCP1Q15431 976 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 RAB41Q5JT25 222 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 LY6G5CQ5SRR4 150 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 SDE2Q6IQ49 451 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 CAVIN1Q6NZI2 390 aaKnown RBP11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 TPGS1Q6ZTW0 290 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 HTR3DQ70Z44 454 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 CEP68Q76N32 757 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 BBS7Q8IWZ6 715 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 MSANTD4Q8NCY6 345 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 IRGQQ8WZA9 623 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 PLD4Q96BZ4 506 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 CHFRQ96EP1 664 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 MED15Q96RN5 788 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 BBS2Q9BXC9 721 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 KLF16Q9BXK1 252 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 MIS12Q9H081 205 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 VPS16Q9H269 839 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 ARHGEF4Q9NR80 690 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 SAMSN1Q9NSI8 373 aaKnown RBP11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 TAB2Q9NYJ8 693 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 DEC1Q9P2X7 70 aa11.74□□□□□ -0.53
ARHGEF39-204ENST00000488918 OTOL1A6NHN0 477 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 PIK3R2O00459 728 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 MDM4O15151 490 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 EGFP01133 1207 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 CORO1AP31146 461 aaKnown RBP11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 EIF2DP41214 584 aaKnown RBP11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 GRIA2P42262 883 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 ARID5AQ03989 594 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 KDSRQ06136 332 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 CCINQ13939 588 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 BSPRYQ5W0U4 402 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 HEATR6Q6AI08 1181 aaKnown RBP11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 SMYD5Q6GMV2 418 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 PM20D1Q6GTS8 502 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 TSSK4Q6SA08 328 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 MAMSTRQ6ZN01 415 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 TRMT11Q7Z4G4 463 aaKnown RBP11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 UNC45BQ8IWX7 931 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 ZNF276Q8N554 614 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 UBR7Q8N806 425 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 NAT16Q8N8M0 369 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 RPLP0P6Q8NHW5 317 aa11.73□□□□□ -0.53
ARHGEF39-204ENST00000488918 IPO4Q8TEX9 1081 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms