RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CXCR5P32302 372 aa20.33■□□□□ 0.84
CCM2-216ENST00000488727 LEXMQ3ZCV2 418 aa20.33■□□□□ 0.84
CCM2-216ENST00000488727 CCNI2Q6ZMN8 369 aaPredicted RBP20.33■□□□□ 0.84
CCM2-216ENST00000488727 WDTC1Q8N5D0 677 aa20.33■□□□□ 0.84
CCM2-216ENST00000488727 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.33■□□□□ 0.84
CCM2-216ENST00000488727 SUSD6Q92537 303 aa20.33■□□□□ 0.84
CCM2-216ENST00000488727 ACBD3Q9H3P7 528 aa20.33■□□□□ 0.84
CCM2-216ENST00000488727 MAGED2Q9UNF1 606 aaPredicted RBP20.33■□□□□ 0.84
CCM2-216ENST00000488727 DENND4CQ5VZ89 1909 aa20.32■□□□□ 0.84
CCM2-216ENST00000488727 MBTPS2O43462 519 aa20.32■□□□□ 0.84
CCM2-216ENST00000488727 TNFRSF8P28908 595 aa20.32■□□□□ 0.84
CCM2-216ENST00000488727 CCR2P41597 374 aa20.32■□□□□ 0.84
CCM2-216ENST00000488727 EPHA5P54756 1037 aa20.32■□□□□ 0.84
CCM2-216ENST00000488727 SLC8A3P57103 927 aa20.32■□□□□ 0.84
CCM2-216ENST00000488727 FMO1Q01740 532 aa20.32■□□□□ 0.84
CCM2-216ENST00000488727 CDR2Q01850 454 aa20.32■□□□□ 0.84
CCM2-216ENST00000488727 SLC5A9Q2M3M2 681 aa20.32■□□□□ 0.84
CCM2-216ENST00000488727 PMF1Q6P1K2 205 aa20.32■□□□□ 0.84
CCM2-216ENST00000488727 SLFN11Q7Z7L1 901 aa20.32■□□□□ 0.84
CCM2-216ENST00000488727 ZNF677Q86XU0 584 aa20.32■□□□□ 0.84
CCM2-216ENST00000488727 NUP93Q8N1F7 819 aa20.32■□□□□ 0.84
CCM2-216ENST00000488727 MYRFLQ96LU7 910 aa20.32■□□□□ 0.84
CCM2-216ENST00000488727 IL21Q9HBE4 155 aa20.32■□□□□ 0.84
CCM2-216ENST00000488727 GABBR2O75899 941 aa20.31■□□□□ 0.84
CCM2-216ENST00000488727 IFRD2Q12894 506 aaPredicted RBP20.31■□□□□ 0.84
CCM2-216ENST00000488727 SMAD4Q13485 552 aaKnown RBP20.31■□□□□ 0.84
CCM2-216ENST00000488727 PABPC1LQ4VXU2 614 aaKnown RBP20.31■□□□□ 0.84
CCM2-216ENST00000488727 RAB41Q5JT25 222 aa20.31■□□□□ 0.84
CCM2-216ENST00000488727 ATAT1Q5SQI0 421 aa20.31■□□□□ 0.84
CCM2-216ENST00000488727 TPCN2Q8NHX9 752 aa20.31■□□□□ 0.84
CCM2-216ENST00000488727 TRMT2BQ96GJ1 504 aaKnown RBP20.31■□□□□ 0.84
CCM2-216ENST00000488727 PSMB7Q99436 277 aa20.31■□□□□ 0.84
CCM2-216ENST00000488727 TTLL2Q9BWV7 592 aa20.31■□□□□ 0.84
CCM2-216ENST00000488727 LHX5Q9H2C1 402 aa20.31■□□□□ 0.84
CCM2-216ENST00000488727 WDR6Q9NNW5 1121 aaKnown RBP20.31■□□□□ 0.84
CCM2-216ENST00000488727 ASAH2Q9NR71 780 aa20.31■□□□□ 0.84
CCM2-216ENST00000488727 IL37Q9NZH6 218 aa20.31■□□□□ 0.84
CCM2-216ENST00000488727 TMEM253P0C7T8 217 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 RGS7P49802 495 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 TAF12Q16514 161 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 GAREM2Q75VX8 874 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 C1orf131Q8NDD1 294 aaKnown RBP20.3■□□□□ 0.84
CCM2-216ENST00000488727 PBKQ96KB5 322 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 POMKQ9H5K3 350 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 ANAPC1Q9H1A4 1944 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 UNC80Q8N2C7 3258 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 CLUHO75153 1309 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 FAM170AA1A519 330 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 H3BQF6 201 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 MYL4P12829 197 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 CDH5P33151 784 aaPredicted RBP20.3■□□□□ 0.84
CCM2-216ENST00000488727 CBX2Q14781 532 aaPredicted RBP20.3■□□□□ 0.84
CCM2-216ENST00000488727 RPS6KA1Q15418 735 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 PRSS36Q5K4E3 855 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 TMEM150AQ86TG1 271 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 SYCE1Q8N0S2 351 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 KCTD13Q8WZ19 329 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 TCEAL4Q96EI5 215 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 RIPOR3Q96MK2 946 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 PCDHB18PQ96TA0 734 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 AGPAT1Q99943 283 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 LRRC1Q9BTT6 524 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 EHD2Q9NZN4 543 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 THEGQ9P2T0 379 aa20.3■□□□□ 0.84
CCM2-216ENST00000488727 FAM92AA1XBS5 289 aa20.29■□□□□ 0.84
CCM2-216ENST00000488727 MOSPD3O75425 235 aa20.29■□□□□ 0.84
CCM2-216ENST00000488727 RTN3O95197 1032 aaPredicted RBP20.29■□□□□ 0.84
CCM2-216ENST00000488727 MTHFRP42898 656 aa20.29■□□□□ 0.84
CCM2-216ENST00000488727 PDCLQ13371 301 aa20.29■□□□□ 0.84
CCM2-216ENST00000488727 PDZD4Q76G19 769 aaPredicted RBP20.29■□□□□ 0.84
CCM2-216ENST00000488727 AENQ8WTP8 325 aaKnown RBP20.29■□□□□ 0.84
CCM2-216ENST00000488727 AVENQ9NQS1 362 aaPredicted RBP20.29■□□□□ 0.84
CCM2-216ENST00000488727 RBM12Q9NTZ6 932 aaKnown RBP20.29■□□□□ 0.84
CCM2-216ENST00000488727 SMARCAL1Q9NZC9 954 aa20.29■□□□□ 0.84
CCM2-216ENST00000488727 USP3Q9Y6I4 520 aa20.29■□□□□ 0.84
CCM2-216ENST00000488727 DOCK8Q8NF50 2099 aa20.29■□□□□ 0.84
CCM2-216ENST00000488727 PIK3R2O00459 728 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 F11P03951 625 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 CYP1A1P04798 512 aaPredicted RBP20.28■□□□□ 0.84
CCM2-216ENST00000488727 GJA1P17302 382 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 YWHAQP27348 245 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 GABRR2P28476 465 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 NOP2P46087 812 aaKnown RBP20.28■□□□□ 0.84
CCM2-216ENST00000488727 RPL34P49207 117 aaKnown RBP20.28■□□□□ 0.84
CCM2-216ENST00000488727 TKTL1P51854 596 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 GALCP54803 685 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 NOMO3P69849 1222 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 ADIGQ0VDE8 80 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 CYP4A22Q5TCH4 519 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 LEMD2Q8NC56 503 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 ITFG1Q8TB96 612 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 STK32AQ8WU08 396 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 RFFLQ8WZ73 363 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 MS4A14Q96JA4 679 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 STIM2Q9P246 746 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 TJP2Q9UDY2 1190 aa20.28■□□□□ 0.84
CCM2-216ENST00000488727 A0A1W2PRU2 124 aa20.27■□□□□ 0.84
CCM2-216ENST00000488727 KCNQ1P51787 676 aa20.27■□□□□ 0.84
CCM2-216ENST00000488727 TAF10Q12962 218 aa20.27■□□□□ 0.84
CCM2-216ENST00000488727 PTCRAQ6ISU1 281 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms