RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 BIRC3Q13489 604 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 BMT2Q1RMZ1 405 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 CHPFQ8IZ52 775 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 FUKQ8N0W3 1084 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 GOLGA5Q8TBA6 731 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 TLR8Q9NR97 1041 aaKnown RBP20.16■□□□□ 0.82
GGPS1-206ENST00000488594 DNAJC17Q9NVM6 304 aaKnown RBP20.16■□□□□ 0.82
GGPS1-206ENST00000488594 WDR35Q9P2L0 1181 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 A0A1W2PQD8 194 aa20.15■□□□□ 0.82
GGPS1-206ENST00000488594 ARHGAP33O14559 1287 aa20.15■□□□□ 0.82
GGPS1-206ENST00000488594 AP1G2O75843 785 aa20.15■□□□□ 0.82
GGPS1-206ENST00000488594 IRF1P10914 325 aa20.15■□□□□ 0.82
GGPS1-206ENST00000488594 P4HA1P13674 534 aa20.15■□□□□ 0.82
GGPS1-206ENST00000488594 CLDN10P78369 228 aa20.15■□□□□ 0.82
GGPS1-206ENST00000488594 NCOA4Q13772 614 aa20.15■□□□□ 0.82
GGPS1-206ENST00000488594 ZNF423Q2M1K9 1284 aa20.15■□□□□ 0.82
GGPS1-206ENST00000488594 EGFLAMQ63HQ2 1017 aa20.15■□□□□ 0.82
GGPS1-206ENST00000488594 MINDY1Q8N5J2 469 aa20.15■□□□□ 0.82
GGPS1-206ENST00000488594 DEFB119Q8N690 84 aa20.15■□□□□ 0.82
GGPS1-206ENST00000488594 IPO4Q8TEX9 1081 aaKnown RBP20.15■□□□□ 0.82
GGPS1-206ENST00000488594 GABRG3Q99928 467 aa20.15■□□□□ 0.82
GGPS1-206ENST00000488594 BBS2Q9BXC9 721 aa20.15■□□□□ 0.82
GGPS1-206ENST00000488594 FAM124BQ9H5Z6 455 aaPredicted RBP20.15■□□□□ 0.82
GGPS1-206ENST00000488594 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.15■□□□□ 0.82
GGPS1-206ENST00000488594 DNAAF2Q9NVR5 837 aaKnown RBP20.15■□□□□ 0.82
GGPS1-206ENST00000488594 MARK1Q9P0L2 795 aa20.15■□□□□ 0.82
GGPS1-206ENST00000488594 TFIP11Q9UBB9 837 aaKnown RBP20.15■□□□□ 0.82
GGPS1-206ENST00000488594 HCN2Q9UL51 889 aa20.15■□□□□ 0.82
GGPS1-206ENST00000488594 NEDD8-MDP1E9PL57 170 aa20.14■□□□□ 0.81
GGPS1-206ENST00000488594 WASP42768 502 aa20.14■□□□□ 0.81
GGPS1-206ENST00000488594 SLC14A1Q13336 389 aa20.14■□□□□ 0.81
GGPS1-206ENST00000488594 KNOP1Q1ED39 458 aaKnown RBP20.14■□□□□ 0.81
GGPS1-206ENST00000488594 MIB1Q86YT6 1006 aa20.14■□□□□ 0.81
GGPS1-206ENST00000488594 TRIML1Q8N9V2 468 aa20.14■□□□□ 0.81
GGPS1-206ENST00000488594 CSNK1G1Q9HCP0 422 aa20.14■□□□□ 0.81
GGPS1-206ENST00000488594 CD248Q9HCU0 757 aa20.14■□□□□ 0.81
GGPS1-206ENST00000488594 CYLDQ9NQC7 956 aa20.14■□□□□ 0.81
GGPS1-206ENST00000488594 FSCN3Q9NQT6 498 aa20.14■□□□□ 0.81
GGPS1-206ENST00000488594 SUSD2Q9UGT4 822 aa20.14■□□□□ 0.81
GGPS1-206ENST00000488594 LSM7Q9UK45 103 aaKnown RBP20.14■□□□□ 0.81
GGPS1-206ENST00000488594 KLK13Q9UKR3 277 aa20.14■□□□□ 0.81
GGPS1-206ENST00000488594 GON4LQ3T8J9 2241 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 PVALEFA0A1B0GWK0 134 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 FAM221BA6H8Z2 402 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 STX6O43752 255 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 GREM1O60565 184 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 CUTAO60888 179 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 TYRP14679 529 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 NDUFV2P19404 249 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 TRIM21P19474 475 aaKnown RBP20.13■□□□□ 0.81
GGPS1-206ENST00000488594 ATP5C1P36542 298 aaKnown RBP20.13■□□□□ 0.81
GGPS1-206ENST00000488594 SYCP2LQ5T4T6 812 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 ACOT1Q86TX2 421 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 PARD3BQ8TEW8 1205 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 FOXJ1Q92949 421 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 WBP2Q969T9 261 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 HSPA12BQ96MM6 686 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 ZNF396Q96N95 335 aaPredicted RBP20.13■□□□□ 0.81
GGPS1-206ENST00000488594 SMOQ99835 787 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 KLF16Q9BXK1 252 aaPredicted RBP20.13■□□□□ 0.81
GGPS1-206ENST00000488594 CYP8B1Q9UNU6 501 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 MYOFQ9NZM1 2061 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 ASPMQ8IZT6 3477 aa20.13■□□□□ 0.81
GGPS1-206ENST00000488594 ATRXP46100 2492 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 PCNX2A6NKB5 2137 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 GFRA2O00451 464 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 TRIM24O15164 1050 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 NDUFS2O75306 463 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 CASP4P49662 377 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 SGSM1Q2NKQ1 1148 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 SHC4Q6S5L8 630 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 SCARA5Q6ZMJ2 495 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 UNC93AQ86WB7 457 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 SLC41A1Q8IVJ1 513 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 CRYBG2Q8N1P7 616 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 ZMIZ2Q8NF64 920 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 SLC2A14Q8TDB8 520 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 ZNF419Q96HQ0 510 aaPredicted RBP20.12■□□□□ 0.81
GGPS1-206ENST00000488594 ACOX2Q99424 681 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 SDCBP2Q9H190 292 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 CACNA1EQ15878 2313 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 PI4KAP42356 2102 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 ZZEF1O43149 2961 aa20.12■□□□□ 0.81
GGPS1-206ENST00000488594 LRRIQ3A6PVS8 624 aaPredicted RBP20.11■□□□□ 0.81
GGPS1-206ENST00000488594 YEATS4O95619 227 aa20.11■□□□□ 0.81
GGPS1-206ENST00000488594 C4BPAP04003 597 aaKnown RBP20.11■□□□□ 0.81
GGPS1-206ENST00000488594 RPN1P04843 607 aaKnown RBP20.11■□□□□ 0.81
GGPS1-206ENST00000488594 CD59P13987 128 aa20.11■□□□□ 0.81
GGPS1-206ENST00000488594 CCDC130P13994 396 aa20.11■□□□□ 0.81
GGPS1-206ENST00000488594 GNSP15586 552 aa20.11■□□□□ 0.81
GGPS1-206ENST00000488594 MAP3K7CLP57077 242 aa20.11■□□□□ 0.81
GGPS1-206ENST00000488594 KLHDC10Q6PID8 442 aa20.11■□□□□ 0.81
GGPS1-206ENST00000488594 PLEKHO2Q8TD55 490 aa20.11■□□□□ 0.81
GGPS1-206ENST00000488594 TAF4BQ92750 862 aa20.11■□□□□ 0.81
GGPS1-206ENST00000488594 MRGPRX1Q96LB2 322 aa20.11■□□□□ 0.81
GGPS1-206ENST00000488594 SLC39A2Q9NP94 309 aa20.11■□□□□ 0.81
GGPS1-206ENST00000488594 SCML2Q9UQR0 700 aa20.11■□□□□ 0.81
GGPS1-206ENST00000488594 PRRT4C9JH25 899 aa20.1■□□□□ 0.81
GGPS1-206ENST00000488594 BEST1O76090 585 aa20.1■□□□□ 0.81
GGPS1-206ENST00000488594 TBX18O95935 607 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms