RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 RBL1P28749 1068 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 GKP32189 559 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 PIK3CBP42338 1070 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 CLK3P49761 638 aaKnown RBP5.14□□□□□ -1.59
ITGB1-214ENST00000488427 COPAP53621 1224 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 SLC10A2Q12908 348 aaPredicted RBP5.14□□□□□ -1.59
ITGB1-214ENST00000488427 SLC9A4Q6AI14 798 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 FCRLBQ6BAA4 426 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 FCRL6Q6DN72 434 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 SKAP1Q86WV1 359 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 HASPINQ8TF76 798 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 HIST1H2AAQ96QV6 131 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 MYD88Q99836 296 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 TBC1D23Q9NUY8 699 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 MAFFQ9ULX9 164 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 TRAPPC8Q9Y2L5 1435 aa5.14□□□□□ -1.59
ITGB1-214ENST00000488427 PLA2R1Q13018 1463 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 SHANK2Q9UPX8 1470 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 A8MVJ9 347 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 TARM1B6A8C7 271 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 RASA4BC9J798 803 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 H7C1Q1 480 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 CES2O00748 559 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 APAF1O14727 1248 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 MGST3O14880 152 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 HNRNPDLO14979 420 aaKnown RBP5.13□□□□□ -1.59
ITGB1-214ENST00000488427 RASA4O43374 803 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 A1BGP04217 495 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 PRIM2P49643 509 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 ITGA8P53708 1063 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 TIRAPP58753 221 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 HOXA4Q00056 320 aaPredicted RBP5.13□□□□□ -1.59
ITGB1-214ENST00000488427 LONRF1Q17RB8 773 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 MRNIPQ6NTE8 343 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 DPY19L2P1Q6NXN4 242 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 TRIM72Q6ZMU5 477 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 PTCHD4Q6ZW05 846 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 TTC30AQ86WT1 665 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 CCDC146Q8IYE0 955 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 MBD3L2Q8NHZ7 208 aaPredicted RBP5.13□□□□□ -1.59
ITGB1-214ENST00000488427 ZNF384Q8TF68 577 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 ABHD5Q8WTS1 349 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 CCDC138Q96M89 665 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 FYTTD1Q96QD9 318 aaKnown RBP5.13□□□□□ -1.59
ITGB1-214ENST00000488427 TBCBQ99426 244 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 IL17RBQ9NRM6 502 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 MYO1AQ9UBC5 1043 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 HPSEQ9Y251 543 aa5.13□□□□□ -1.59
ITGB1-214ENST00000488427 WRNQ14191 1432 aaPredicted RBP eCLIP5.13□□□□□ -1.59
ITGB1-214ENST00000488427 DENND4BO75064 1496 aaPredicted RBP5.13□□□□□ -1.59
ITGB1-214ENST00000488427 CFAP74Q9C0B2 1584 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 A0A1W2PPC4 97 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 PMPCBO75439 489 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 USP1O94782 785 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 ELFN1P0C7U0 828 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 SLC5A1P13866 664 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 CREB1P16220 341 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 TSHRP16473 764 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 FGFR2P21802 821 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 PCSK6P29122 969 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 DGKQP52824 942 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 E2F1Q01094 437 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 GRM1Q13255 1194 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 PTCHD3Q3KNS1 767 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 ARL13BQ3SXY8 428 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 ZNF362Q5T0B9 420 aaPredicted RBP5.12□□□□□ -1.59
ITGB1-214ENST00000488427 L1TD1Q5T7N2 865 aaKnown RBP5.12□□□□□ -1.59
ITGB1-214ENST00000488427 FAXCQ5TGI0 409 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 FBXO38Q6PIJ6 1188 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 AMIGO2Q86SJ2 522 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 LIX1LQ8IVB5 337 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 TXLNBQ8N3L3 684 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 FSTL5Q8N475 847 aaPredicted RBP5.12□□□□□ -1.59
ITGB1-214ENST00000488427 SNX27Q96L92 541 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 FAM227BQ96M60 508 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 SEMA4CQ9C0C4 833 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 ZNF700Q9H0M5 742 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 SLC25A32Q9H2D1 315 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 R3HDMLQ9H3Y0 253 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 ARFGAP3Q9NP61 516 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 SH3BP4Q9P0V3 963 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 KAT6AQ92794 2004 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 TCOF1Q13428 1488 aaKnown RBP5.12□□□□□ -1.59
ITGB1-214ENST00000488427 SYNMO15061 1565 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 MYO3AQ8NEV4 1616 aa5.12□□□□□ -1.59
ITGB1-214ENST00000488427 CEP350Q5VT06 3117 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 BTBD19C9JJ37 291 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 EXOC5O00471 708 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 CHRM5P08912 532 aaPredicted RBP5.11□□□□□ -1.59
ITGB1-214ENST00000488427 JUPP14923 745 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 FBLP22087 321 aaKnown RBP5.11□□□□□ -1.59
ITGB1-214ENST00000488427 ITPKBP27987 946 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 CTGFP29279 349 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 SLC5A2P31639 672 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 TM4SF4P48230 202 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 HTRA4P83105 476 aaPredicted RBP5.11□□□□□ -1.59
ITGB1-214ENST00000488427 TXNL4AP83876 142 aaKnown RBP5.11□□□□□ -1.59
ITGB1-214ENST00000488427 BRD3Q15059 726 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 IZUMO3Q5VZ72 239 aa5.11□□□□□ -1.59
ITGB1-214ENST00000488427 ZNF772Q68DY9 489 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms