RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 CBWD6Q4V339 395 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 CBWD3Q5JTY5 395 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 CBWD5Q5RIA9 395 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 TTC30AQ86WT1 665 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 DDX42Q86XP3 938 aaKnown RBP eCLIP11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 RLN3Q8WXF3 142 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 TATDN2Q93075 761 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 EXOC4Q96A65 974 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 ERLEC1Q96DZ1 483 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 LOXL4Q96JB6 756 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 NT5C1AQ9BXI3 368 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 CYP3A43Q9HB55 503 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 TMEM8AQ9HCN3 771 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 CYLDQ9NQC7 956 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 SPHK2Q9NRA0 654 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 COMMD8Q9NX08 183 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 SCML2Q9UQR0 700 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 SH3BP1Q9Y3L3 701 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 MAP1BP46821 2468 aaKnown RBP11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 AKAP13Q12802 2813 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 USP24Q9UPU5 2620 aa11.85□□□□□ -0.51
PCYT1A-215ENST00000488235 TULP2O00295 520 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 APODP05090 189 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 KRT13P13646 458 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 EIF2DP41214 584 aaKnown RBP11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 GRIA2P42262 883 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 KIF11P52732 1056 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 RAD23BP54727 409 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 MRPS21P82921 87 aaKnown RBP11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 ANO4Q32M45 955 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 AASDHQ4L235 1098 aaPredicted RBP11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 PPM1JQ5JR12 505 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 PMS2CLQ68D20 193 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 TOGARAM2Q6ZUX3 1019 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 HTR3DQ70Z44 454 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 SLC4A11Q8NBS3 891 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 ENGASEQ8NFI3 743 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 OLIG1Q8TAK6 271 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 BHMTQ93088 406 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 CNOT6LQ96LI5 555 aaKnown RBP11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 DUSP9Q99956 384 aaKnown RBP11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 FBXO44Q9H4M3 255 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 TLR8Q9NR97 1041 aaKnown RBP11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 CISHQ9NSE2 258 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 TBC1D14Q9P2M4 693 aa11.84□□□□□ -0.51
PCYT1A-215ENST00000488235 MYO18AQ92614 2054 aaKnown RBP11.83□□□□□ -0.51
PCYT1A-215ENST00000488235 GON4LQ3T8J9 2241 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 LAMA5O15230 3695 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 BCLAF3A2AJT9 711 aaKnown RBP11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 TRIM49BA6NDI0 452 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 PATE3B3GLJ2 98 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 KIF20AO95235 890 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 KLKB1P03952 638 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 RARGP13631 454 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 RPL13P26373 211 aaKnown RBP11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 GBP1P32455 592 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 WASP42768 502 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 MXI1P50539 228 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 CREB5Q02930 508 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 GAD2Q05329 585 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 ENPEPQ07075 957 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 EDRF1Q3B7T1 1238 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 STPG1Q5TH74 334 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 KRT39Q6A163 491 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 ANKRD40Q6AI12 368 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 Q6ZNB5 142 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 TPGS1Q6ZTW0 290 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 ZC3H3Q8IXZ2 948 aaKnown RBP11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 NDRG1Q92597 394 aaKnown RBP11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 CCDC47Q96A33 483 aaKnown RBP11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 CNTNAP3BQ96NU0 1288 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 ACOX2Q99424 681 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 DUSP16Q9BY84 665 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 CNTNAP3Q9BZ76 1288 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 IMPG2Q9BZV3 1241 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 NACA2Q9H009 215 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 RAB20Q9NX57 234 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 MBD1Q9UIS9 605 aaPredicted RBP11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 PCDHGA5Q9Y5G8 931 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 USP3Q9Y6I4 520 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 MYH10P35580 1976 aa11.83□□□□□ -0.52
PCYT1A-215ENST00000488235 A0A1W2PQF6 199 aa11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 TBC1D3BA6NDS4 549 aa11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 PRRT4C9JH25 899 aa11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 NEDD8-MDP1E9PL57 170 aa11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 CAVIN2O95810 425 aa11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 ADRB1P08588 477 aa11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 TYRP14679 529 aa11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 GTF2H1P32780 548 aa11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 ATP5C1P36542 298 aaKnown RBP11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 TNFRSF4P43489 277 aa11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 LIMK1P53667 647 aa11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 ELF2Q15723 593 aa11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 MAP7D1Q3KQU3 841 aa11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 USP39Q53GS9 565 aaKnown RBP11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 EGFLAMQ63HQ2 1017 aa11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 BHLHA9Q7RTU4 235 aa11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 CCDC186Q7Z3E2 898 aa11.82□□□□□ -0.52
PCYT1A-215ENST00000488235 TERB1Q8NA31 727 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms