RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 OTUB2Q96DC9 234 aa24.93■■□□□ 1.58
RNF38-208ENST00000488058 KREMEN1Q96MU8 473 aa24.93■■□□□ 1.58
RNF38-208ENST00000488058 M0QYV0 167 aa24.92■■□□□ 1.58
RNF38-208ENST00000488058 ATG13O75143 517 aa24.92■■□□□ 1.58
RNF38-208ENST00000488058 SETSIPP0DME0 302 aa24.92■■□□□ 1.58
RNF38-208ENST00000488058 SLC6A11P48066 632 aa24.92■■□□□ 1.58
RNF38-208ENST00000488058 YWHAGP61981 247 aaKnown RBP eCLIP24.92■■□□□ 1.58
RNF38-208ENST00000488058 GAB4Q2WGN9 574 aa24.92■■□□□ 1.58
RNF38-208ENST00000488058 FBXO43Q4G163 708 aa24.92■■□□□ 1.58
RNF38-208ENST00000488058 HSP90AA4PQ58FG1 418 aa24.92■■□□□ 1.58
RNF38-208ENST00000488058 LCLAT1Q6UWP7 414 aa24.92■■□□□ 1.58
RNF38-208ENST00000488058 RSRC2Q7L4I2 434 aaKnown RBP24.92■■□□□ 1.58
RNF38-208ENST00000488058 IRF2BP1Q8IU81 584 aa24.92■■□□□ 1.58
RNF38-208ENST00000488058 FAM114A1Q8IWE2 563 aa24.92■■□□□ 1.58
RNF38-208ENST00000488058 SIX6OS1Q8N1H7 587 aa24.92■■□□□ 1.58
RNF38-208ENST00000488058 ARHGAP18Q8N392 663 aa24.92■■□□□ 1.58
RNF38-208ENST00000488058 RPLP0P6Q8NHW5 317 aa24.92■■□□□ 1.58
RNF38-208ENST00000488058 NDRG1Q92597 394 aaKnown RBP24.92■■□□□ 1.58
RNF38-208ENST00000488058 EZH1Q92800 747 aaPredicted RBP24.92■■□□□ 1.58
RNF38-208ENST00000488058 NELL1Q92832 810 aa24.92■■□□□ 1.58
RNF38-208ENST00000488058 THAP9Q9H5L6 903 aa24.92■■□□□ 1.58
RNF38-208ENST00000488058 CLIC5Q9NZA1 410 aa24.92■■□□□ 1.58
RNF38-208ENST00000488058 CHURC1-FNTBB4DL54 471 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 ZBED1O96006 694 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 LCP1P13796 627 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 HOXC13P31276 330 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 PLA2G4AP47712 749 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 FNTBP49356 437 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 RGS7P49802 495 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 SEC13P55735 322 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 GAD2Q05329 585 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 DMWDQ09019 674 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 EFEMP1Q12805 493 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 ANO4Q32M45 955 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 KLHDC10Q6PID8 442 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 GBP6Q6ZN66 633 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 GPT2Q8TD30 523 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 CDK5RAP1Q96SZ6 601 aaKnown RBP24.91■■□□□ 1.58
RNF38-208ENST00000488058 HINFPQ9BQA5 517 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.91■■□□□ 1.58
RNF38-208ENST00000488058 SLC8A2Q9UPR5 921 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 PIEZO1Q92508 2521 aa24.91■■□□□ 1.58
RNF38-208ENST00000488058 K7ESF4 209 aa24.9■■□□□ 1.58
RNF38-208ENST00000488058 HMBSP08397 361 aa24.9■■□□□ 1.58
RNF38-208ENST00000488058 SLC9A1P19634 815 aa24.9■■□□□ 1.58
RNF38-208ENST00000488058 ERCC5P28715 1186 aaPredicted RBP24.9■■□□□ 1.58
RNF38-208ENST00000488058 KDSRQ06136 332 aa24.9■■□□□ 1.58
RNF38-208ENST00000488058 CNGA2Q16280 664 aa24.9■■□□□ 1.58
RNF38-208ENST00000488058 BTBD8Q5XKL5 378 aa24.9■■□□□ 1.58
RNF38-208ENST00000488058 GJB7Q6PEY0 223 aa24.9■■□□□ 1.58
RNF38-208ENST00000488058 TRIM65Q6PJ69 517 aa24.9■■□□□ 1.58
RNF38-208ENST00000488058 C12orf40Q86WS4 652 aa24.9■■□□□ 1.58
RNF38-208ENST00000488058 SECISBP2LQ93073 1101 aaKnown RBP24.9■■□□□ 1.58
RNF38-208ENST00000488058 ZSWIM1Q9BR11 485 aa24.9■■□□□ 1.58
RNF38-208ENST00000488058 POLR3BQ9NW08 1133 aaPredicted RBP24.9■■□□□ 1.58
RNF38-208ENST00000488058 KIAA1549LQ6ZVL6 1849 aa24.9■■□□□ 1.58
RNF38-208ENST00000488058 PIK3R2O00459 728 aa24.89■■□□□ 1.58
RNF38-208ENST00000488058 LILRB5O75023 590 aa24.89■■□□□ 1.58
RNF38-208ENST00000488058 PAPSS2O95340 614 aaPredicted RBP24.89■■□□□ 1.58
RNF38-208ENST00000488058 MFAP3P55082 362 aa24.89■■□□□ 1.58
RNF38-208ENST00000488058 STILQ15468 1287 aa24.89■■□□□ 1.58
RNF38-208ENST00000488058 ARHGAP44Q17R89 818 aa24.89■■□□□ 1.58
RNF38-208ENST00000488058 HTR3DQ70Z44 454 aa24.89■■□□□ 1.58
RNF38-208ENST00000488058 NAT16Q8N8M0 369 aa24.89■■□□□ 1.58
RNF38-208ENST00000488058 PNKPQ96T60 521 aa24.89■■□□□ 1.58
RNF38-208ENST00000488058 SPHK2Q9NRA0 654 aa24.89■■□□□ 1.58
RNF38-208ENST00000488058 APODP05090 189 aa24.88■■□□□ 1.57
RNF38-208ENST00000488058 PRKCSHP14314 528 aaPredicted RBP24.88■■□□□ 1.57
RNF38-208ENST00000488058 USP8P40818 1118 aa24.88■■□□□ 1.57
RNF38-208ENST00000488058 ZNF132P52740 706 aa24.88■■□□□ 1.57
RNF38-208ENST00000488058 APBA1Q02410 837 aa24.88■■□□□ 1.57
RNF38-208ENST00000488058 MAN2A1Q16706 1144 aa24.88■■□□□ 1.57
RNF38-208ENST00000488058 EXOC3L4Q17RC7 722 aa24.88■■□□□ 1.57
RNF38-208ENST00000488058 PKDCCQ504Y2 493 aa24.88■■□□□ 1.57
RNF38-208ENST00000488058 PM20D1Q6GTS8 502 aa24.88■■□□□ 1.57
RNF38-208ENST00000488058 TMEM25Q86YD3 366 aa24.88■■□□□ 1.57
RNF38-208ENST00000488058 KCTD13Q8WZ19 329 aa24.88■■□□□ 1.57
RNF38-208ENST00000488058 ARHGEF4Q9NR80 690 aa24.88■■□□□ 1.57
RNF38-208ENST00000488058 STRIP2Q9ULQ0 834 aa24.88■■□□□ 1.57
RNF38-208ENST00000488058 PES1O00541 588 aaKnown RBP24.87■■□□□ 1.57
RNF38-208ENST00000488058 GREM1O60565 184 aa24.87■■□□□ 1.57
RNF38-208ENST00000488058 STC2O76061 302 aa24.87■■□□□ 1.57
RNF38-208ENST00000488058 PXNP49023 591 aaPredicted RBP24.87■■□□□ 1.57
RNF38-208ENST00000488058 C2orf27AQ580R0 203 aa24.87■■□□□ 1.57
RNF38-208ENST00000488058 TPGS1Q6ZTW0 290 aa24.87■■□□□ 1.57
RNF38-208ENST00000488058 ENOSF1Q7L5Y1 443 aa24.87■■□□□ 1.57
RNF38-208ENST00000488058 ZNF276Q8N554 614 aa24.87■■□□□ 1.57
RNF38-208ENST00000488058 SUMF1Q8NBK3 374 aa24.87■■□□□ 1.57
RNF38-208ENST00000488058 ACDQ96AP0 544 aa24.87■■□□□ 1.57
RNF38-208ENST00000488058 MARCH2Q9P0N8 246 aa24.87■■□□□ 1.57
RNF38-208ENST00000488058 ZFHX2Q9C0A1 2572 aaPredicted RBP24.86■■□□□ 1.57
RNF38-208ENST00000488058 SLC12A8A0AV02 714 aa24.86■■□□□ 1.57
RNF38-208ENST00000488058 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.86■■□□□ 1.57
RNF38-208ENST00000488058 NEDD8-MDP1E9PL57 170 aa24.86■■□□□ 1.57
RNF38-208ENST00000488058 K7EQS6 105 aa24.86■■□□□ 1.57
RNF38-208ENST00000488058 HOXC11O43248 304 aaPredicted RBP24.86■■□□□ 1.57
RNF38-208ENST00000488058 KAT7O95251 611 aa24.86■■□□□ 1.57
RNF38-208ENST00000488058 EIF2DP41214 584 aaKnown RBP24.86■■□□□ 1.57
RNF38-208ENST00000488058 COG7P83436 770 aa24.86■■□□□ 1.57
RNF38-208ENST00000488058 PMF1Q6P1K2 205 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms