RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 PRCPP42785 496 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 PLA2G4AP47712 749 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 SLC8A3P57103 927 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 FKBP3Q00688 224 aaKnown RBP13.12□□□□□ -0.31
SREBF1-215ENST00000487401 CREB5Q02930 508 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 DCAF17Q5H9S7 520 aaPredicted RBP13.12□□□□□ -0.31
SREBF1-215ENST00000487401 C10orf120Q5SQS8 335 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 ZNF658Q5TYW1 1059 aaPredicted RBP13.12□□□□□ -0.31
SREBF1-215ENST00000487401 EMC10Q5UCC4 262 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 SFTPA1Q8IWL2 248 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 IL17RCQ8NAC3 791 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 DDX1Q92499 740 aaKnown RBP13.12□□□□□ -0.31
SREBF1-215ENST00000487401 SEMA4DQ92854 862 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 SMARCE1Q969G3 411 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 WBP2Q969T9 261 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 TMEM176AQ96HP8 235 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 CNOT6LQ96LI5 555 aaKnown RBP13.12□□□□□ -0.31
SREBF1-215ENST00000487401 GSDMAQ96QA5 445 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 TPSD1Q9BZJ3 242 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 CYLDQ9NQC7 956 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 CISHQ9NSE2 258 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 BCCIPQ9P287 314 aaKnown RBP eCLIP13.12□□□□□ -0.31
SREBF1-215ENST00000487401 WDR35Q9P2L0 1181 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 DNMT3LQ9UJW3 386 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 NAGPAQ9UK23 515 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 DCHS1Q96JQ0 3298 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 NUP210Q8TEM1 1887 aaPredicted RBP13.11□□□□□ -0.31
SREBF1-215ENST00000487401 ANTXRLA6NF34 631 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 SGK1O00141 431 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 SLC16A3O15427 465 aaKnown RBP13.11□□□□□ -0.31
SREBF1-215ENST00000487401 MAP3K13O43283 966 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 TULP3O75386 442 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 CAVIN2O95810 425 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 PSEN1P49768 467 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 KIF11P52732 1056 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 MCCD1P59942 119 aaPredicted RBP13.11□□□□□ -0.31
SREBF1-215ENST00000487401 MESP2Q0VG99 397 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 PLA2G2CQ5R387 149 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 PPP1R26Q5T8A7 1209 aaPredicted RBP13.11□□□□□ -0.31
SREBF1-215ENST00000487401 GRAMD4Q6IC98 578 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 KLHDC10Q6PID8 442 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 TMEM92Q6UXU6 159 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 TRMT11Q7Z4G4 463 aaKnown RBP13.11□□□□□ -0.31
SREBF1-215ENST00000487401 RASSF3Q86WH2 238 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 ETFBKMTQ8IXQ9 262 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 PGBD3Q8N328 593 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 KCNV2Q8TDN2 545 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 XPO6Q96QU8 1125 aaKnown RBP13.11□□□□□ -0.31
SREBF1-215ENST00000487401 CDK5RAP1Q96SZ6 601 aaKnown RBP13.11□□□□□ -0.31
SREBF1-215ENST00000487401 NMUR1Q9HB89 426 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 DNAJC17Q9NVM6 304 aaKnown RBP13.11□□□□□ -0.31
SREBF1-215ENST00000487401 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.11□□□□□ -0.31
SREBF1-215ENST00000487401 OSER1Q9NX31 292 aa13.11□□□□□ -0.31
SREBF1-215ENST00000487401 DNAH14Q0VDD8 3507 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 NEDD8-MDP1E9PL57 170 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 MDM4O15151 490 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 ZBTB24O43167 697 aaPredicted RBP13.1□□□□□ -0.31
SREBF1-215ENST00000487401 KCNA4P22459 653 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 KIR2DL1P43626 348 aaPredicted RBP13.1□□□□□ -0.31
SREBF1-215ENST00000487401 YWHAEP62258 255 aaKnown RBP13.1□□□□□ -0.31
SREBF1-215ENST00000487401 STIM1Q13586 685 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 BYSLQ13895 437 aaKnown RBP13.1□□□□□ -0.31
SREBF1-215ENST00000487401 COBLL1Q53SF7 1204 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 PPM1JQ5JR12 505 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 C10orf76Q5T2E6 689 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 ANKRD40Q6AI12 368 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 SDE2Q6IQ49 451 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 TPGS1Q6ZTW0 290 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 CCDC186Q7Z3E2 898 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 MIB1Q86YT6 1006 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 ARHGAP18Q8N392 663 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 PHTF2Q8N3S3 785 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 MDGA1Q8NFP4 955 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 HMGB4Q8WW32 186 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 TATDN2Q93075 761 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 SPACA7Q96KW9 195 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 BBS2Q9BXC9 721 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 UBXN6Q9BZV1 441 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 SMOC1Q9H4F8 434 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 FAM124BQ9H5Z6 455 aaPredicted RBP13.1□□□□□ -0.31
SREBF1-215ENST00000487401 ARMCX3Q9UH62 379 aaPredicted RBP13.1□□□□□ -0.31
SREBF1-215ENST00000487401 NUDT5Q9UKK9 219 aa13.1□□□□□ -0.31
SREBF1-215ENST00000487401 CACNA1AO00555 2505 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 TCRBV21S2A2A0A5A6 115 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 BCLAF3A2AJT9 711 aaKnown RBP13.09□□□□□ -0.31
SREBF1-215ENST00000487401 GREM1O60565 184 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 TYRP14679 529 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 HNRNPLP14866 589 aaKnown RBP eCLIP13.09□□□□□ -0.31
SREBF1-215ENST00000487401 LIMK1P53667 647 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 RAD23BP54727 409 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 COG7P83436 770 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 LRRC63Q05C16 580 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 CBWD6Q4V339 395 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 CBWD3Q5JTY5 395 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 CBWD5Q5RIA9 395 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 STPG1Q5TH74 334 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 ARHGAP17Q68EM7 881 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 SCD5Q86SK9 330 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 ZNF513Q8N8E2 541 aaPredicted RBP13.09□□□□□ -0.31
SREBF1-215ENST00000487401 TERB1Q8NA31 727 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms