RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	RPL10A	P62906	217 aa	Known RBP	13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	CYP4F8	P98187	520 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	TNK2	Q07912	1038 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	KLHL30	Q0D2K2	578 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	CCDC173	Q0VFZ6	552 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	ARID5B	Q14865	1188 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	MAPRE1	Q15691	268 aa	Known RBP	13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	DDR2	Q16832	855 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	SGO2	Q562F6	1265 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	TDRD12	Q587J7	1177 aa	Known RBP	13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	SMYD5	Q6GMV2	418 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	IRF2BP2	Q7Z5L9	587 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	YAF2	Q8IY57	180 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	CRYBG2	Q8N1P7	616 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	C12orf29	Q8N999	325 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	CSGALNACT1	Q8TDX6	532 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	SYN2	Q92777	582 aa	Predicted RBP	13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	SECISBP2L	Q93073	1101 aa	Known RBP	13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	SMG9	Q9H0W8	520 aa	Known RBP	13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	TRPV5	Q9NQA5	729 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	FAM49B	Q9NUQ9	324 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	GTSE1	Q9NYZ3	720 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	GMEB2	Q9UKD1	530 aa		13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	CDV3	Q9UKY7	258 aa	Known RBP	13.79	□□□□□ -0.2
NR1H3-223	ENST00000486991	ATG2B	Q96BY7	2078 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	CSH1	P0DML2	217 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	CSH2	P0DML3	217 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	VDR	P11473	427 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	CCDC130	P13994	396 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	CYP11B1	P15538	503 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	WEE1	P30291	646 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	CCR3	P51677	355 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	CACNA2D1	P54289	1103 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	GPR158	Q5T848	1215 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	TAF3	Q5VWG9	929 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	C1orf228	Q6PIY5	440 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	NOP9	Q86U38	636 aa	Known RBP	13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	MYCBPAP	Q8TBZ2	947 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	EPS8L1	Q8TE68	723 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	TFAP2B	Q92481	460 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	TRMT2B	Q96GJ1	504 aa	Known RBP	13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	PCED1B	Q96HM7	432 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	MYRFL	Q96LU7	910 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	PANX2	Q96RD6	677 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	MED10	Q9BTT4	135 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	PDCL3	Q9H2J4	239 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	OBP2A	Q9NY56	170 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	UXT	Q9UBK9	157 aa	Predicted RBP	13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	KIAA1257	Q9ULG3	409 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	KIAA1549L	Q6ZVL6	1849 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	MYOF	Q9NZM1	2061 aa		13.78	□□□□□ -0.2
NR1H3-223	ENST00000486991	SOBP	A7XYQ1	873 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	SPECC1L-ADORA2A	F8WAN1	911 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991		K7ESF4	209 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	CHAD	O15335	359 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	MED7	O43513	233 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	GDF9	O60383	454 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	SERPING1	P05155	500 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	DDX6	P26196	483 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	ADORA2B	P29275	332 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	HNRNPH3	P31942	346 aa	Known RBP	13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	PRKCI	P41743	596 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	NRL	P54845	237 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	CYP27A1	Q02318	531 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	LMNB2	Q03252	620 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	FCHO2	Q0JRZ9	810 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	SIM2	Q14190	667 aa	Predicted RBP	13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	PON2	Q15165	354 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	GOLGA7B	Q2TAP0	167 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	PKN3	Q6P5Z2	889 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	WDR59	Q6PJI9	974 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	MAMSTR	Q6ZN01	415 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	C4orf50	Q6ZRC1	276 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	GPR161	Q8N6U8	529 aa	Known RBP	13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	CELF5	Q8N6W0	485 aa	Known RBP	13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	RIN3	Q8TB24	985 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	SLC20A1	Q8WUM9	679 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	CYFIP2	Q96F07	1278 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	MSANTD3	Q96H12	275 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	SLC46A2	Q9BY10	475 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	HAUS4	Q9H6D7	363 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	TASP1	Q9H6P5	420 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	SEPT11	Q9NVA2	429 aa	Known RBP	13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	RAB23	Q9ULC3	237 aa		13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.77	□□□□□ -0.21
NR1H3-223	ENST00000486991	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	PRR5-ARHGAP8	B1AHC4	643 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991		O00370	1275 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	CLDN5	O00501	218 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	MME	P08473	750 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	BDNF	P23560	247 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	CTH	P32929	405 aa		13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	PXN	P49023	591 aa	Predicted RBP	13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	MLLT6	P55198	1093 aa	Predicted RBP	13.76	□□□□□ -0.21
NR1H3-223	ENST00000486991	USP46	P62068	366 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms